RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 CAPN13Q6MZZ7 669 aaPredicted RBP5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 LILRA6Q6PI73 481 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 SMARCD3Q6STE5 483 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 COMTD1Q86VU5 262 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 RNF168Q8IYW5 571 aaPredicted RBP5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 PGBD3Q8N328 593 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 STX19Q8N4C7 294 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 TERB1Q8NA31 727 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 OR8J3Q8NGG0 315 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 OR5K1Q8NHB7 308 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 PHF10Q8WUB8 498 aaKnown RBP5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 NCSTNQ92542 709 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 HLA-CQ95604 372 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 CMTM7Q96FZ5 175 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 FAM129BQ96TA1 746 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 RSPO3Q9BXY4 272 aaPredicted RBP5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 MKRN2Q9H000 416 aaKnown RBP5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 C11orf49Q9H6J7 331 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 MS4A12Q9NXJ0 267 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 GIN1Q9NXP7 522 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 SPHK1Q9NYA1 384 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 KLHL3Q9UH77 587 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 FAM32AQ9Y421 112 aaKnown RBP5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 CLCA3PQ9Y6N3 262 aa5.38□□□□□ -1.55
TNFSF4-202ENST00000367718 TCF20Q9UGU0 1960 aaKnown RBP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 PLXND1Q9Y4D7 1925 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 SCAMP2O15127 329 aaKnown RBP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 SPINT1O43278 529 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 TMPRSS11DO60235 418 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 ERN1O75460 977 aaKnown RBP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 BMP10O95393 424 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 EML2O95834 649 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 PTHP01270 115 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 C8GP07360 202 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 CYP2A6P11509 494 aaPredicted RBP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 PRPS1L1P21108 318 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 CD9P21926 228 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 GDI1P31150 447 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 MMP12P39900 470 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 P2RY2P41231 377 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 MAPK9P45984 424 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 MAD2L1Q13257 205 aaPredicted RBP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 DEPDC1Q5TB30 811 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 TTC23Q5W5X9 447 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 VITQ6UXI7 678 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 SLCO4C1Q6ZQN7 724 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 ANKRD53Q8N9V6 530 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 DDHD1Q8NEL9 900 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 CXorf40AQ8TE69 158 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 C16orf78Q8WTQ4 265 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 FAR1Q8WVX9 515 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 NECTIN4Q96NY8 510 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 SLX1AQ9BQ83 275 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 CCDC177Q9NQR7 707 aaPredicted RBP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 TMEM74BQ9NUR3 256 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 TVP23BQ9NYZ1 205 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 CNIH4Q9P003 139 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 RNF6Q9Y252 685 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 ABHD14A-ACY1A0A1B0GW23 586 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 ZC3H12DA2A288 527 aaKnown RBP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 LINC01553A4QN01 128 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 ANKRD33BA6NCL7 494 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 ARNTLO00327 626 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 ERI3O43414 337 aaKnown RBP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 NUAK1O60285 661 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 PRMT3O60678 531 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 SCN2BO60939 215 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 SOX30O94993 753 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 SCELO95171 688 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 DLGAP3O95886 979 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 OLFM2O95897 454 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 SOD1P00441 154 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 PENKP01210 267 aaPredicted RBP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 GASTP01350 101 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 TIA1P31483 386 aaKnown RBP eCLIP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 CDK6Q00534 326 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 CSTF1Q05048 431 aaKnown RBP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 NPRL3Q12980 569 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 PPIGQ13427 754 aaKnown RBP eCLIP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 CLCA4Q14CN2 919 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 TBC1D25Q3MII6 688 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 GPAT3Q53EU6 434 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 SLC35F1Q5T1Q4 408 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 PRAMEF13Q5VWM6 474 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 TMEM107Q6UX40 140 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 FAM92BQ6ZTR7 304 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 ANKRD33Q7Z3H0 272 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 TSEN54Q7Z6J9 526 aaKnown RBP5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 ABI3BPQ7Z7G0 1075 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 ENTHD1Q8IYW4 607 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 ADGRF3Q8IZF5 1079 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 SLC34A3Q8N130 599 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 RLN3Q8WXF3 142 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 SLC9A6Q92581 669 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 ECHDC3Q96DC8 303 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 ZHX1-C8orf76Q96EF9 292 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 NRBF2Q96F24 287 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 HHIPL1Q96JK4 782 aa5.37□□□□□ -1.55
TNFSF4-202ENST00000367718 CENPOQ9BU64 300 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms