RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 BCKDKO14874 412 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 OR1F1O43749 312 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 FABP1P07148 127 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 CEBPBP17676 345 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 PTX3P26022 381 aaPredicted RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 PLK1P53350 603 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 RPA4Q13156 261 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ELAVL3Q14576 367 aaKnown RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 TCEAL1Q15170 157 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 WSCD2Q2TBF2 565 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 CCNYL2Q5T2Q4 361 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ANKRD54Q6NXT1 300 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 Q6ZSR6 202 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 SV2AQ7L0J3 742 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF433Q8N7K0 673 aaPredicted RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 OR4C5Q8NGB2 326 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 SMPDL3AQ92484 453 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 EVA1AQ9H8M9 152 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 DDX4Q9NQI0 724 aaKnown RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ASB6Q9NWX5 421 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 LAMP5Q9UJQ1 280 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ZFR2Q9UPR6 939 aaKnown RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ITGB4P16144 1822 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 UPK3BL1B0FP48 263 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 FAM155AB1AL88 458 aaPredicted RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 UPK3BL2E5RIL1 263 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 MAFKO60675 156 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 SH3BGRLO75368 114 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 UGT2B17O75795 530 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 HTR3BO95264 441 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 AP2S1P53680 142 aaPredicted RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 MANFP55145 182 aaKnown RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 RBM48Q5RL73 367 aaKnown RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 GK5Q6ZS86 529 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 NLRC3Q7RTR2 1065 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ERI1Q8IV48 349 aaKnown RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF548Q8NEK5 533 aaPredicted RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 RPLP0P6Q8NHW5 317 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ADAM32Q8TC27 787 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 PPP3R2Q96LZ3 170 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 RBM4BQ9BQ04 359 aaKnown RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 FNDC11Q9BVV2 318 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 RBM4Q9BWF3 364 aaKnown RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 RNF32Q9H0A6 362 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 UNKLQ9H9P5 680 aaKnown RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 CDHR5Q9HBB8 845 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 GNG13Q9P2W3 67 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 C17orf113A0A1B0GUU1 675 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 WDR27A2RRH5 827 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 L7N2F9 121 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 LEFTY2O00292 366 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 KLK10O43240 276 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 PRPS2P11908 318 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 QSOX2Q6ZRP7 698 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF572Q7Z3I7 529 aaPredicted RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 LAPTM4BQ86VI4 370 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 MDGA1Q8NFP4 955 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 NETO1Q8TDF5 533 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 CCDC107Q8WV48 283 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 RTKNQ9BST9 563 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF471Q9BX82 626 aaPredicted RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 TP63Q9H3D4 680 aaPredicted RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ERVMER34-1Q9H9K5 563 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 EMC9Q9Y3B6 208 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ASTN1O14525 1302 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 CYP3A7-CYP3A51PA0A087WV96 503 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 C2orf72A6NCS6 295 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 CHADO15335 359 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 DBIP07108 87 aaKnown RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 CYP3A7P24462 503 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 VIPR1P32241 457 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 PITPNAQ00169 270 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 MBTD1Q05BQ5 628 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 CACNG1Q06432 222 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 UBAP2LQ14157 1087 aaKnown RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 EIPR1Q53HC9 387 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 CYB5R2Q6BCY4 276 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 SIGIRRQ6IA17 410 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 DCXRQ7Z4W1 244 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 GPR65Q8IYL9 337 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 SLC47A1Q96FL8 570 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 SACM1LQ9NTJ5 587 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ARHGAP20Q9P2F6 1191 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 RAP2CQ9Y3L5 183 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 CNTNAP5Q8WYK1 1306 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 TEX51A0A1B0GUA7 166 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 K7EPI3 171 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 MPPED1O15442 326 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 NRP2O60462 931 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 NDST3O95803 873 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 EIF4EP06730 217 aaKnown RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 TPOP07202 933 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 SLC2A1P11166 492 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 TSHRP16473 764 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 RAB3AP20336 220 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 POU6F2P78424 691 aaPredicted RBP8.33□□□□□ -1.08
SYNE1-206ENST00000367253 MERTKQ12866 999 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 DNASE1L3Q13609 305 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 HEPACAMQ14CZ8 416 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 PTCHD3Q3KNS1 767 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms