RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SLC47A1Q96FL8 570 aa5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 FAM71F1Q96KD3 344 aaPredicted RBP5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 LRRC2Q9BYS8 371 aa5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 MIS12Q9H081 205 aa5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 ZBP1Q9H171 429 aa5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 AZI2Q9H6S1 392 aa5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 UPF2Q9HAU5 1272 aaKnown RBP5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 ZBTB20Q9HC78 741 aaPredicted RBP5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 SPG21Q9NZD8 308 aa5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 CACNG4Q9UBN1 327 aa5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 ZDHHC2Q9UIJ5 367 aa5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 KMT2BQ9UMN6 2715 aaPredicted RBP5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 SPTBN2O15020 2390 aa5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 ACACBO00763 2458 aa5.13□□□□□ -1.59
RNU4-39P-201ENST00000362455 CACNA1IQ9P0X4 2223 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 OTOGLQ3ZCN5 2332 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 M0QZ92 97 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 HIP1O00291 1037 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 STBD1O95210 358 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 GOSR1O95249 250 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 NR3C1P04150 777 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 FGF3P11487 239 aaPredicted RBP5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 DARSP14868 501 aaKnown RBP5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 ATP6V1B1P15313 513 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 SOAT1P35610 550 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 NR2C2P49116 596 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 NLRP11P59045 1033 aaKnown RBP5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 LGALS3BPQ08380 585 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 ILF3Q12906 894 aaKnown RBP eCLIP5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 TRDNQ13061 729 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 ANGPT1Q15389 498 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 TAZQ16635 292 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 DCAF10Q5QP82 559 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 ZNF449Q6P9G9 518 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 SPSB3Q6PJ21 355 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 EXOC3L1Q86VI1 746 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 TUSC5Q8IXB3 177 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 CDK20Q8IZL9 346 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 DNAJC22Q8N4W6 341 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 DCLK2Q8N568 766 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 METTL27Q8N6F8 245 aaPredicted RBP5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 MAB21L3Q8N8X9 362 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 MSANTD4Q8NCY6 345 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 SLC24A4Q8NFF2 622 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 EXOC6Q8TAG9 804 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 CASP10Q92851 521 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 RIT1Q92963 219 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 CD101Q93033 1021 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 ST6GAL2Q96JF0 529 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 NECTIN4Q96NY8 510 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 PSD2Q9BQI7 771 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 LZTS2Q9BRK4 669 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 LSG1Q9H089 658 aaKnown RBP5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 SNX25Q9H3E2 840 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 TFB2MQ9H5Q4 396 aaKnown RBP5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 RETREG1Q9H6L5 497 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 TUFT1Q9NNX1 390 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 ZNF302Q9NR11 478 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 GSN-AS1Q9NRJ2 163 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 ABCB8Q9NUT2 735 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 MTRRQ9UBK8 725 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 R4GN57 208 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 CHD8Q9HCK8 2581 aa5.12□□□□□ -1.59
RNU4-39P-201ENST00000362455 PLXNA3P51805 1871 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 ATG2AQ2TAZ0 1938 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 TRAV24A0A0B4J272 114 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 ERICH2A1L162 156 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 TMEM150BA6NC51 233 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 XPNPEP2O43895 674 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 PRKNO60260 465 aaPredicted RBP5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 PRAF2O60831 178 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 DDHD2O94830 711 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 FGF5P12034 268 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 CD27P26842 260 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 KIF5BP33176 963 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 SLC11A1P49279 550 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 SLC26A2P50443 739 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 ALDH3A2P51648 485 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 GPC3P51654 580 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 CLCN4P51793 760 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 ILF2Q12905 390 aaKnown RBP5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 DMP1Q13316 513 aaPredicted RBP5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 SMC1AQ14683 1233 aaKnown RBP5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 PTPN14Q15678 1187 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 ODF2Q5BJF6 829 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 CYB5D1Q6P9G0 228 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 FAM43BQ6ZT52 329 aaPredicted RBP5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 NIPA1Q7RTP0 329 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 PLA2G4DQ86XP0 818 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 LGI2Q8N0V4 545 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 LRRC43Q8N309 656 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 METTL13Q8N6R0 699 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 SUMF1Q8NBK3 374 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 DMBX1Q8NFW5 382 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 ZNF707Q96C28 371 aaPredicted RBP5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 KLHL5Q96PQ7 755 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 PKP4Q99569 1192 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 RPP25Q9BUL9 199 aaKnown RBP5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 LAT2Q9GZY6 243 aa5.11□□□□□ -1.59
RNU4-39P-201ENST00000362455 RWDD1Q9H446 243 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms