RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 TRMOQ9BU70 441 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 CRB3Q9BUF7 120 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 SSBP4Q9BWG4 385 aaPredicted RBP3.75□□□□□ -1.81
CNOT4-202ENST00000356162 REXO4Q9GZR2 422 aaKnown RBP3.75□□□□□ -1.81
CNOT4-202ENST00000356162 ADNPQ9H2P0 1102 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 KLHL31Q9H511 634 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 SOX17Q9H6I2 414 aaPredicted RBP3.75□□□□□ -1.81
CNOT4-202ENST00000356162 BRF2Q9HAW0 419 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 TMBIM4Q9HC24 238 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 LYRM4Q9HD34 91 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 SEMA4BQ9NPR2 832 aaPredicted RBP3.75□□□□□ -1.81
CNOT4-202ENST00000356162 OXSMQ9NWU1 459 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 LYARQ9NX58 379 aaKnown RBP3.75□□□□□ -1.81
CNOT4-202ENST00000356162 HCN3Q9P1Z3 774 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 TRPC4Q9UBN4 977 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 C19orf25Q9UFG5 118 aaPredicted RBP3.75□□□□□ -1.81
CNOT4-202ENST00000356162 SNX6Q9UNH7 406 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 RNF11Q9Y3C5 154 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 NAALAD2Q9Y3Q0 740 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 ACACAQ13085 2346 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 URB1O60287 2271 aaKnown RBP3.75□□□□□ -1.81
CNOT4-202ENST00000356162 AHCTF1Q8WYP5 2266 aa3.75□□□□□ -1.81
CNOT4-202ENST00000356162 MAP1BP46821 2468 aaKnown RBP3.74□□□□□ -1.81
CNOT4-202ENST00000356162 ZNF860A6NHJ4 632 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 PSMD12O00232 456 aaPredicted RBP3.74□□□□□ -1.81
CNOT4-202ENST00000356162 PEX12O00623 359 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 SOCS6O14544 535 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 NKX2-8O15522 239 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 KLHL41O60662 606 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 TRIM13O60858 407 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 SPAG7O75391 227 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 OR4F21O95013 312 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 BMP10O95393 424 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 ESRRBO95718 433 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 TBX6O95947 436 aaPredicted RBP3.74□□□□□ -1.81
CNOT4-202ENST00000356162 KRT6AP02538 564 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 KRT6BP04259 564 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 HEXBP07686 556 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 FHP07954 510 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 HMOX2P30519 316 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 ALDH3A1P30838 453 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 OTX2P32243 289 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 SSR2P43308 183 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 CCR10P46092 362 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 XCR1P46094 333 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 KRT6CP48668 564 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 RPS13P62277 151 aaKnown RBP3.74□□□□□ -1.81
CNOT4-202ENST00000356162 MAT1AQ00266 395 aaKnown RBP3.74□□□□□ -1.81
CNOT4-202ENST00000356162 KLC1Q07866 573 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 CUL3Q13618 768 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 ATP1A4Q13733 1029 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 DDX39BQ13838 428 aaKnown RBP3.74□□□□□ -1.81
CNOT4-202ENST00000356162 ERV3-1Q14264 604 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 CPSF6Q16630 551 aaKnown RBP eCLIP3.74□□□□□ -1.81
CNOT4-202ENST00000356162 DEFB109BQ30KR1 87 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 DEFB134Q4QY38 66 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 CFAP157Q5JU67 520 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 DEPDC1Q5TB30 811 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 ATP1A1-AS1Q5TC04 95 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 KHDRBS2Q5VWX1 349 aaKnown RBP3.74□□□□□ -1.81
CNOT4-202ENST00000356162 FRG2Q64ET8 278 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 TTC19Q6DKK2 380 aaPredicted RBP3.74□□□□□ -1.81
CNOT4-202ENST00000356162 ADNP2Q6IQ32 1131 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 QSOX2Q6ZRP7 698 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 RNF165Q6ZSG1 346 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 RPS27LQ71UM5 84 aaKnown RBP3.74□□□□□ -1.81
CNOT4-202ENST00000356162 C10orf107Q8IVU9 208 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 APLFQ8IW19 511 aaPredicted RBP3.74□□□□□ -1.81
CNOT4-202ENST00000356162 ZCCHC7Q8N3Z6 543 aaKnown RBP3.74□□□□□ -1.81
CNOT4-202ENST00000356162 CCNYL1Q8N7R7 359 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 OR51Q1Q8NH59 317 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 TCP10LQ8TDR4 215 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 TRPC4APQ8TEL6 797 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 RGMAQ96B86 450 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 TLCD1Q96CP7 247 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 FER1L6-AS2Q96M78 137 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 FRG2BQ96QU4 278 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 ELOVL6Q9H5J4 265 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 VIPAS39Q9H9C1 493 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 SLC17A7Q9P2U7 560 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 TUBD1Q9UJT1 453 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 C3orf18Q9UK00 162 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 ADAM29Q9UKF5 820 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 MRPS33Q9Y291 106 aaKnown RBP3.74□□□□□ -1.81
CNOT4-202ENST00000356162 MMACHCQ9Y4U1 282 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 AKAP13Q12802 2813 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 IGF2RP11717 2491 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 LOC102723996A0A087X1L8 192 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 IDSB3KWA1 339 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 MANBAO00462 879 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 FFAR3O14843 346 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 BIRC5O15392 142 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 GPR42O15529 346 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 CHST10O43529 356 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 ALOX12BO75342 701 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 HPP00738 406 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 BPGMP07738 259 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 H2AFB1P0C5Y9 115 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 H2AFB2P0C5Z0 115 aa3.74□□□□□ -1.81
CNOT4-202ENST00000356162 DHRS4L1P0CG22 281 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms