RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TNFRSF11BO00300 401 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 KPNA5O15131 536 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SUV39H1O43463 412 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TMPRSS11DO60235 418 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TPST2O60704 377 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 DNAJB6O75190 326 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 KCNK2O95069 426 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 CLTBP09497 229 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 C6P13671 934 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 POLR2EP19388 210 aaKnown RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 EPHA5P54756 1037 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 PCBP3P57721 371 aaKnown RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SCARB2Q14108 478 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 VEZF1Q14119 521 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 PTGES3Q15185 160 aaKnown RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 HIST2H2ACQ16777 129 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 C2orf27AQ580R0 203 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TNFAIP8L2Q6P589 184 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 P2RY8Q86VZ1 359 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 FAM129CQ86XR2 697 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TRAPPC5Q8IUR0 188 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 CROCCP3Q8IVE0 287 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SLC44A2Q8IWA5 706 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 KLHDC8AQ8IYD2 350 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 LAS2Q8IYD9 372 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TCAIMQ8N3R3 496 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 CHCHD4Q8N4Q1 142 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 B3GNT7Q8NFL0 401 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 GOT1L1Q8NHS2 421 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 POF1BQ8WVV4 589 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 JPH3Q8WXH2 748 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 RORBQ92753 470 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 DTD2Q96FN9 168 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 QRSL1Q9H0R6 528 aaKnown RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 KLHL31Q9H511 634 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 REEP4Q9H6H4 257 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 REEP1Q9H902 201 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 MBNL1Q9NR56 388 aaKnown RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SIRT3Q9NTG7 399 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SCHIP1Q9P0W5 487 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 KLHL20Q9Y2M5 609 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 PCDHGA4Q9Y5G9 962 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 KCNE3Q9Y6H6 103 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 CEP290O15078 2479 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 GRXCR1A8MXD5 290 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 EIF3FO00303 357 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 RNASET2O00584 256 aaKnown RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 RGS10O43665 173 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 ATG13O75143 517 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 POP7O75817 140 aaKnown RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 CHRM5P08912 532 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 ADORA3P0DMS8 318 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 C1GALT1C1LP0DN25 315 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 PTNP21246 168 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 PCGF2P35227 344 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 GGT2P36268 569 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TSPAN7P41732 249 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 XCR1P46094 333 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 CD97P48960 835 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 PHEXP78562 749 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SSX1Q16384 188 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 PROX2Q3B8N5 592 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SYTL3Q4VX76 610 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 NEK10Q6ZWH5 1172 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 BMPERQ8N8U9 685 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 OR10G2Q8NGC3 310 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SPPL3Q8TCT6 385 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SLC38A5Q8WUX1 472 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 KLK6Q92876 244 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 VMP1Q96GC9 406 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TOX2Q96NM4 488 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 VPS35Q96QK1 796 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 EPYCQ99645 322 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 COPS4Q9BT78 406 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 ZSCAN5AQ9BUG6 496 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 CRISPLD2Q9H0B8 497 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 OR52A5Q9H2C5 316 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 C6orf106Q9H6K1 298 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 BRF2Q9HAW0 419 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 CTPS2Q9NRF8 586 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TBC1D23Q9NUY8 699 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 MS4A12Q9NXJ0 267 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SAGE1Q9NXZ1 904 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 REV1Q9UBZ9 1251 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 ATP6V1HQ9UI12 483 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 MYO10Q9HD67 2058 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TNRC18O15417 2968 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 DENND4AQ7Z401 1863 aa5.75□□□□□ -1.49
CLCN3-201ENST00000347613 ABHD14A-ACY1A0A1B0GW23 586 aa5.75□□□□□ -1.49
CLCN3-201ENST00000347613 MGAT4DA6NG13 374 aa5.75□□□□□ -1.49
CLCN3-201ENST00000347613 UGDHO60701 494 aa5.75□□□□□ -1.49
CLCN3-201ENST00000347613 ATP6V1G1O75348 118 aa5.75□□□□□ -1.49
CLCN3-201ENST00000347613 TIMP1P01033 207 aa5.75□□□□□ -1.49
CLCN3-201ENST00000347613 CKMT1AP12532 417 aa5.75□□□□□ -1.49
CLCN3-201ENST00000347613 ZNF30P17039 623 aa5.75□□□□□ -1.49
CLCN3-201ENST00000347613 WASP42768 502 aa5.75□□□□□ -1.49
CLCN3-201ENST00000347613 SEPHS1P49903 392 aa5.75□□□□□ -1.49
CLCN3-201ENST00000347613 TAS2R38P59533 333 aa5.75□□□□□ -1.49
CLCN3-201ENST00000347613 SPIBQ01892 262 aa5.75□□□□□ -1.49
CLCN3-201ENST00000347613 PCDH1Q08174 1060 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms