RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 BMXP51813 675 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 TLE4Q04727 773 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 SLC1A5Q15758 541 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CPSF6Q16630 551 aaKnown RBP eCLIP5.97□□□□□ -1.45
VCAN-203ENST00000343200 ARL13AQ5H913 290 aaPredicted RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 OR6C4Q8NGE1 309 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 SEMA6BQ9H3T3 888 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 RPF2Q9H7B2 306 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 KCNK13Q9HB14 408 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 GMEB2Q9UKD1 530 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 EXO1Q9UQ84 846 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 PCDHB7Q9Y5E2 793 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 HSPE1-MOB4S4R3N1 261 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 GATCO43716 136 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 AKT2P31751 481 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 RAB28P51157 221 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 GANABQ14697 944 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 PTPRRQ15256 657 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 HACD4Q5VWC8 232 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 RAP1GAP2Q684P5 730 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CLEC6AQ6EIG7 209 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CEP68Q76N32 757 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 TFAP2DQ7Z6R9 452 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 RAVER1Q8IY67 606 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 HORMAD2Q8N7B1 307 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 OR4L1Q8NH43 312 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 GLYATL2Q8WU03 294 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 RBMXL1Q96E39 390 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 GLOD4Q9HC38 313 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 MAN2C1Q9NTJ4 1040 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 NLGN3Q9NZ94 848 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 VSX1Q9NZR4 365 aaPredicted RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 TSPAN16Q9UKR8 245 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 ARID2Q68CP9 1835 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 PNPLA6Q8IY17 1366 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 ATG13O75143 517 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 MED6O75586 246 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 H1F0P07305 194 aaKnown RBP5.96□□□□□ -1.45
VCAN-203ENST00000343200 MLLT3P42568 568 aaPredicted RBP5.96□□□□□ -1.45
VCAN-203ENST00000343200 EEF1A2Q05639 463 aaKnown RBP5.96□□□□□ -1.45
VCAN-203ENST00000343200 SNTB2Q13425 540 aaKnown RBP5.96□□□□□ -1.45
VCAN-203ENST00000343200 ADGRF1Q5T601 910 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 PRSS48Q7RTY5 328 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 RASGEF1CQ8N431 466 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 BANPQ8N9N5 519 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 HPSE2Q8WWQ2 592 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 ST8SIA2Q92186 375 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 RAB3CQ96E17 227 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 NOL4LQ96MY1 436 aaPredicted RBP5.96□□□□□ -1.45
VCAN-203ENST00000343200 PRRT1Q99946 306 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 EFCAB11Q9BUY7 163 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 NT5DC2Q9H857 520 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 BCO1Q9HAY6 547 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 LGR6Q9HBX8 967 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 RANGRFQ9HD47 186 aaPredicted RBP5.96□□□□□ -1.45
VCAN-203ENST00000343200 KLHL9Q9P2J3 617 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 GTF2IRD1Q9UHL9 959 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 A0A1W2PQL4 384 aaPredicted RBP5.96□□□□□ -1.45
VCAN-203ENST00000343200 A0A1W2PRB8 838 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 TSPAN11A1L157 253 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 MTMR11A4FU01 709 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 MOXD2PA6NHM9 499 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 WASH4PA8MWX3 477 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 ARVCFO00192 962 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 LYRM1O43325 122 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 M6PRP20645 277 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 NFYBP25208 207 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 IL12BP29460 328 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 OPRL1P41146 370 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 RPS5P46782 204 aaKnown RBP5.96□□□□□ -1.45
VCAN-203ENST00000343200 PTH2RP49190 550 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 NRG1Q02297 640 aaPredicted RBP5.96□□□□□ -1.45
VCAN-203ENST00000343200 PMPCAQ10713 525 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 SF3A2Q15428 464 aaKnown RBP5.96□□□□□ -1.45
VCAN-203ENST00000343200 TMEM183BQ1AE95 376 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 B3GLCTQ6Y288 498 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 KCTD20Q7Z5Y7 419 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 MTURNQ8N3F0 131 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 PLD5Q8N7P1 536 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 PIGBQ92521 554 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 OR2M2Q96R28 347 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 PITHD1Q9GZP4 211 aaPredicted RBP5.96□□□□□ -1.45
VCAN-203ENST00000343200 PRDM12Q9H4Q4 367 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 WDR26Q9H7D7 661 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 RNF121Q9H920 327 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 LIN28AQ9H9Z2 209 aaKnown RBP5.96□□□□□ -1.45
VCAN-203ENST00000343200 CHST7Q9NS84 486 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 RLIMQ9NVW2 624 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 SLC6A5Q9Y345 797 aa5.96□□□□□ -1.45
VCAN-203ENST00000343200 PTPRFP10586 1907 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 H3BMQ9 156 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 PCDH17O14917 1159 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 ALOX15BO15296 676 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 METTL15P1P0C7V9 234 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 CAMK2BQ13554 666 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 HLFQ16534 295 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 ZDHHC20Q5W0Z9 365 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 RDH10Q8IZV5 341 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 KLHDC1Q8N7A1 406 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 CCDC71LQ8N9Z2 235 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms