RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 LTB4RQ15722 352 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 DUOXA1Q1HG43 343 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 ARHGAP15Q53QZ3 475 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 SPIN4Q56A73 249 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 FAM209BQ5JX69 171 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 NBPF12Q5TAG4 269 aaPredicted RBP17.75■□□□□ 0.43
SMPD1-201ENST00000342245 LIPKQ5VXJ0 399 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 RGS7BPQ6MZT1 257 aaPredicted RBP17.75■□□□□ 0.43
SMPD1-201ENST00000342245 SAMD7Q7Z3H4 446 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 LINGO1Q96FE5 620 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 NIPSNAP1Q9BPW8 284 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 TRIM62Q9BVG3 475 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 COA4Q9NYJ1 87 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 PQLC2LA1A4F0 135 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 OLFM2O95897 454 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 GAAP10253 952 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 ENGP17813 658 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 CDKN2CP42773 168 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 P2RY14Q15391 338 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 MARC1Q5VT66 337 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 PRAMEF18Q5VWM3 479 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 SYNPOQ8N3V7 929 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 FOXJ1Q92949 421 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 TADA1Q96BN2 335 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 GPR20Q99678 358 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 ISYNA1Q9NPH2 558 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 TRPS1Q9UHF7 1281 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 CORO2BQ9UQ03 480 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 KCNK7Q9Y2U2 307 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 COMMD10Q9Y6G5 202 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 LCTP09848 1927 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 ARRDC5A6NEK1 342 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 MPTX1A8MV57 137 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 AKAP8O43823 692 aaKnown RBP17.74■□□□□ 0.43
SMPD1-201ENST00000342245 CFDP00746 253 aaPredicted RBP17.74■□□□□ 0.43
SMPD1-201ENST00000342245 HBQ1P09105 142 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 CLCN7P51798 805 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 RAG2P55895 527 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 CSTF1Q05048 431 aaKnown RBP17.74■□□□□ 0.43
SMPD1-201ENST00000342245 ETFDHQ16134 617 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 SV2CQ496J9 727 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 GPR33Q49SQ1 333 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 RAB41Q5JT25 222 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 ZNF772Q68DY9 489 aaPredicted RBP17.74■□□□□ 0.43
SMPD1-201ENST00000342245 MSANTD2Q6P1R3 559 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 AFTPHQ6ULP2 937 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 MAMSTRQ6ZN01 415 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 HSD17B13Q7Z5P4 300 aaPredicted RBP17.74■□□□□ 0.43
SMPD1-201ENST00000342245 DNAJC5GQ8N7S2 189 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 RAET1EQ8TD07 263 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 TRAPPC12Q8WVT3 735 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 PIH1D2Q8WWB5 315 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 FAM193BQ96PV7 902 aaPredicted RBP17.74■□□□□ 0.43
SMPD1-201ENST00000342245 SLC38A2Q96QD8 506 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 ABHD16BQ9H3Z7 469 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 NDUFAF4Q9P032 175 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 COPZ2Q9P299 210 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 FTSJ1Q9UET6 329 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 ZMYM5Q9UJ78 669 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 HCN2Q9UL51 889 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 ZNF451Q9Y4E5 1061 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 TNS1Q9HBL0 1735 aaKnown RBP17.74■□□□□ 0.43
SMPD1-201ENST00000342245 CLDN5O00501 218 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 HPGDSO60760 199 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 MMP2P08253 660 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 FGF9P31371 208 aaPredicted RBP17.74■□□□□ 0.43
SMPD1-201ENST00000342245 CRISP1P54107 249 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 TEAD4Q15561 434 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 GPR68Q15743 365 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 RGMBQ6NW40 437 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 PAQR9Q6ZVX9 377 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 MOB2Q70IA6 237 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 KRT74Q7RTS7 529 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 FGD2Q7Z6J4 655 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 LAPTM4BQ86VI4 370 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 EIF4E3Q8N5X7 224 aaKnown RBP17.74■□□□□ 0.43
SMPD1-201ENST00000342245 TOP6BLQ8N6T0 577 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 HDHD2Q9H0R4 259 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 DPAGT1Q9H3H5 408 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 PHIPQ8WWQ0 1821 aa17.74■□□□□ 0.43
SMPD1-201ENST00000342245 NYNRINQ9P2P1 1898 aaKnown RBP17.73■□□□□ 0.43
SMPD1-201ENST00000342245 PKMP14618 531 aaKnown RBP17.73■□□□□ 0.43
SMPD1-201ENST00000342245 TAF6P49848 677 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 SPIBQ01892 262 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 SLC14A1Q13336 389 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 TMEM132BQ14DG7 1078 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 MANEALQ5VSG8 457 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 HTR3DQ70Z44 454 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 ANKRD46Q86W74 232 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 MIB1Q86YT6 1006 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 SAMD14Q8IZD0 417 aaPredicted RBP17.73■□□□□ 0.43
SMPD1-201ENST00000342245 RGL4Q8IZJ4 473 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 LILRB2Q8N423 598 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 RTL3Q8N8U3 475 aaKnown RBP17.73■□□□□ 0.43
SMPD1-201ENST00000342245 PPP1R16BQ96T49 567 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 SEC22CQ9BRL7 303 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 MS4A7Q9GZW8 240 aaPredicted RBP17.73■□□□□ 0.43
SMPD1-201ENST00000342245 RLIMQ9NVW2 624 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 EMC3Q9P0I2 261 aa17.73■□□□□ 0.43
SMPD1-201ENST00000342245 UXTQ9UBK9 157 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms