RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 C7orf61Q8IZ16 206 aa19.21■□□□□ 0.67
SPG7-202ENST00000341316 ZNF300Q96RE9 604 aaPredicted RBP19.21■□□□□ 0.67
SPG7-202ENST00000341316 EPYCQ99645 322 aa19.21■□□□□ 0.67
SPG7-202ENST00000341316 TAS2R9Q9NYW1 312 aa19.21■□□□□ 0.67
SPG7-202ENST00000341316 THAP10Q9P2Z0 257 aaPredicted RBP19.21■□□□□ 0.67
SPG7-202ENST00000341316 TESMINQ9Y4I5 508 aa19.21■□□□□ 0.67
SPG7-202ENST00000341316 E9PQ18 207 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 PLPP1O14494 284 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 PTX3P26022 381 aaPredicted RBP19.2■□□□□ 0.66
SPG7-202ENST00000341316 NCS1P62166 190 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 SCARB2Q14108 478 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 CLCA4Q14CN2 919 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 INAQ16352 499 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 UBE2Q1Q7Z7E8 422 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 ADGRF3Q8IZF5 1079 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 ANKRD53Q8N9V6 530 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 MENTQ9BUN1 341 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 ZNF717Q9BY31 904 aaPredicted RBP19.2■□□□□ 0.66
SPG7-202ENST00000341316 RUBCNLQ9H714 662 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 MBNL1Q9NR56 388 aaKnown RBP19.2■□□□□ 0.66
SPG7-202ENST00000341316 SCN3BQ9NY72 215 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 A0A1W2PRB8 838 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 MID1O15344 667 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 ERGP11308 486 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 GJA4P35212 333 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 FCHO2Q0JRZ9 810 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 NPRL3Q12980 569 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 SYT6Q5T7P8 510 aaPredicted RBP19.2■□□□□ 0.66
SPG7-202ENST00000341316 KIAA1614Q5VZ46 1190 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 Q6ZPB1 254 aaPredicted RBP19.2■□□□□ 0.66
SPG7-202ENST00000341316 LRRTM4Q86VH4 590 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 DYNC2LI1Q8TCX1 351 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 UBE2E3Q969T4 207 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 TMEM106CQ9BVX2 250 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 ABCG4Q9H172 646 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 RASSF1Q9NS23 344 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 SERGEFQ9UGK8 458 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 TSC22D4Q9Y3Q8 395 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 PCDHGB3Q9Y5G1 929 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 LYVE1Q9Y5Y7 322 aa19.2■□□□□ 0.66
SPG7-202ENST00000341316 DENND4AQ7Z401 1863 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 FUT4P22083 530 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 EIF2B2P49770 351 aaKnown RBP19.19■□□□□ 0.66
SPG7-202ENST00000341316 RPP38P78345 283 aaKnown RBP19.19■□□□□ 0.66
SPG7-202ENST00000341316 RPA4Q13156 261 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 MAD2L1BPQ15013 274 aaPredicted RBP19.19■□□□□ 0.66
SPG7-202ENST00000341316 PDGFRLQ15198 375 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 METRNLQ641Q3 311 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 DSG4Q86SJ6 1040 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 ZNF540Q8NDQ6 660 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 OR6Q1Q8NGQ2 317 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 OR5K2Q8NHB8 316 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 F2RL3Q96RI0 385 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 BTBD2Q9BX70 525 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 PLA2G2FQ9BZM2 168 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 FBXO8Q9NRD0 319 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 OR1A2Q9Y585 309 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 DOCK9Q9BZ29 2069 aa19.19■□□□□ 0.66
SPG7-202ENST00000341316 FEZF1A0PJY2 475 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 CHI3L1P36222 383 aaPredicted RBP19.18■□□□□ 0.66
SPG7-202ENST00000341316 SERPINB10P48595 397 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 CXCR4P61073 352 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 LINC00299Q6ZSB3 139 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 KRT78Q8N1N4 520 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 RAB7BQ96AH8 199 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 TMEM38AQ9H6F2 299 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 SLAMF7Q9NQ25 335 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 PCDHGA4Q9Y5G9 962 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 HSPE1-MOB4S4R3N1 261 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 MYO9BQ13459 2157 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 PCDHGA12O60330 932 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 FAM20BO75063 409 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 KAT7O95251 611 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 SOAT1P35610 550 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 RPL3P39023 403 aaKnown RBP19.18■□□□□ 0.66
SPG7-202ENST00000341316 PRIM2P49643 509 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 ST13P50502 369 aaKnown RBP19.18■□□□□ 0.66
SPG7-202ENST00000341316 DNASE1L3Q13609 305 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 AGBL4Q5VU57 503 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.18■□□□□ 0.66
SPG7-202ENST00000341316 TSPYL5Q86VY4 417 aaPredicted RBP19.18■□□□□ 0.66
SPG7-202ENST00000341316 C17orf64Q86WR6 236 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 CADM3Q8N126 398 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 OR52J3Q8NH60 311 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 MTERF3Q96E29 417 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 FEVQ99581 238 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 PITX2Q99697 317 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 APOL4Q9BPW4 351 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 CXorf36Q9H7Y0 433 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 RLIMQ9NVW2 624 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 AP1M2Q9Y6Q5 423 aa19.18■□□□□ 0.66
SPG7-202ENST00000341316 RGS10O43665 173 aa19.17■□□□□ 0.66
SPG7-202ENST00000341316 WBP4O75554 376 aaKnown RBP19.17■□□□□ 0.66
SPG7-202ENST00000341316 TGM1P22735 817 aa19.17■□□□□ 0.66
SPG7-202ENST00000341316 TGFBR1P36897 503 aa19.17■□□□□ 0.66
SPG7-202ENST00000341316 CDK6Q00534 326 aa19.17■□□□□ 0.66
SPG7-202ENST00000341316 RUNX3Q13761 415 aa19.17■□□□□ 0.66
SPG7-202ENST00000341316 DUSP6Q16828 381 aa19.17■□□□□ 0.66
SPG7-202ENST00000341316 OXR1Q8N573 874 aa19.17■□□□□ 0.66
SPG7-202ENST00000341316 APH1BQ8WW43 257 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms