RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 ABCE1P61221 599 aaKnown RBP12.45□□□□□ -0.42
TUBD1-202ENST00000340993 SKP1P63208 163 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 PDCD2Q16342 344 aaPredicted RBP12.45□□□□□ -0.42
TUBD1-202ENST00000340993 TMEM35AQ53FP2 167 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 C18orf63Q68DL7 685 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 CYP20A1Q6UW02 462 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 GPR155Q7Z3F1 870 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 COMMD6Q7Z4G1 85 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 MRGPREQ86SM8 312 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 OR4N5Q8IXE1 308 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 ZNF781Q8N8C0 355 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 SERINC2Q96SA4 455 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 SERPINI1Q99574 410 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 ZNF717Q9BY31 904 aaPredicted RBP12.45□□□□□ -0.42
TUBD1-202ENST00000340993 FBXL4Q9UKA2 621 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 STK38LQ9Y2H1 464 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 ATP6AP2A0A1C7CYW4 349 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 FOXE1O00358 373 aaPredicted RBP12.44□□□□□ -0.42
TUBD1-202ENST00000340993 LDB3O75112 727 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 ATP6AP2O75787 350 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 CELA2AP08217 269 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 UROSP10746 265 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 CPN2P22792 545 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 PPP2R1BP30154 601 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 BSGP35613 385 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 SLC1A6P48664 564 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 ST13P50502 369 aaKnown RBP12.44□□□□□ -0.42
TUBD1-202ENST00000340993 BST1Q10588 318 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 SLC13A2Q13183 592 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 STX3Q13277 289 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 UGT8Q16880 541 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 GALNTL6Q49A17 601 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 FAM180BQ6P0A1 224 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 RAB43Q86YS6 212 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 TWIST2Q8WVJ9 160 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 DYDC1Q8WWB3 177 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 PTCHD1Q96NR3 888 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 TBCDQ9BTW9 1192 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 TRIM55Q9BYV6 548 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 SLC26A1Q9H2B4 701 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 ACBD3Q9H3P7 528 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 PRORYQ9H606 182 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 WDR54Q9H977 334 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 EML4Q9HC35 981 aaKnown RBP12.44□□□□□ -0.42
TUBD1-202ENST00000340993 C14orf105Q9NVL8 296 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 P4HTMQ9NXG6 502 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 C5AR2Q9P296 337 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 ADGRE2Q9UHX3 823 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 LHX6Q9UPM6 363 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 POLHQ9Y253 713 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 TRAF6Q9Y4K3 522 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 POLR3HQ9Y535 204 aaPredicted RBP12.44□□□□□ -0.42
TUBD1-202ENST00000340993 HS3ST3B1Q9Y662 390 aa12.44□□□□□ -0.42
TUBD1-202ENST00000340993 HMGB1P1B2RPK0 211 aaPredicted RBP12.43□□□□□ -0.42
TUBD1-202ENST00000340993 SOCS6O14544 535 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 PIP5K1BO14986 540 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 SEC24DO94855 1032 aaPredicted RBP12.43□□□□□ -0.42
TUBD1-202ENST00000340993 JUNP05412 331 aaKnown RBP12.43□□□□□ -0.42
TUBD1-202ENST00000340993 FAM87AP0C7U9 286 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 C8orf89P0DMQ9 161 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 CCL11P51671 97 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 RAB38P57729 211 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 MC1RQ01726 317 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 SSPNQ14714 243 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 NSDHLQ15738 373 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 COLEC12Q5KU26 742 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 CCNYL2Q5T2Q4 361 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 KANK2Q63ZY3 851 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 KIRREL2Q6UWL6 708 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 NUDT13Q86X67 352 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 SRFBP1Q8NEF9 429 aaKnown RBP12.43□□□□□ -0.42
TUBD1-202ENST00000340993 OR2T11Q8NH01 316 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 ADAMTS17Q8TE56 1095 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 SEC16BQ96JE7 1060 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 ARHGAP9Q9BRR9 750 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 TUBB1Q9H4B7 451 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 ZNF160Q9HCG1 818 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 NECTIN3Q9NQS3 549 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 LANCL2Q9NS86 450 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 PNPOQ9NVS9 261 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 TEX10Q9NXF1 929 aaPredicted RBP12.43□□□□□ -0.42
TUBD1-202ENST00000340993 VPS29Q9UBQ0 182 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 NXT1Q9UKK6 140 aaKnown RBP12.43□□□□□ -0.42
TUBD1-202ENST00000340993 DAPP1Q9UN19 280 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 ATG4BQ9Y4P1 393 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 DNAJC15Q9Y5T4 150 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 CHD6Q8TD26 2715 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 IGLV3-12A0A075B6K2 115 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 PEX12O00623 359 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 BIRC5O15392 142 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 PRMT3O60678 531 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 RECKO95980 971 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 PTGER1P34995 402 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 ALDH9A1P49189 494 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 PPP2R2AP63151 447 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 GALNT1Q10472 559 aaPredicted RBP12.43□□□□□ -0.42
TUBD1-202ENST00000340993 TBL3Q12788 808 aaKnown RBP12.43□□□□□ -0.42
TUBD1-202ENST00000340993 CUL3Q13618 768 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 NR6A1Q15406 480 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms