RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 LDOC1O95751 146 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 JUNP05412 331 aaKnown RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 H1F0P07305 194 aaKnown RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 ACSL1P33121 698 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 CDKN1CP49918 316 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 TAS2R41P59536 307 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 MVKQ03426 396 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 EIF4EBP2Q13542 120 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 FAM182AQ5T1J6 154 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 ZNF550Q7Z398 422 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 LRRC25Q8N386 305 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 PLA2G15Q8NCC3 412 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 KBTBD8Q8NFY9 601 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 FGF14Q92915 247 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 WBP2Q969T9 261 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 NACC2Q96BF6 587 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 CMKLR1Q99788 373 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 TRIM2Q9C040 744 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 MYNNQ9NPC7 610 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 TBC1D23Q9NUY8 699 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 TIPRLO75663 272 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 IL3P08700 152 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 CD72P21854 359 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 IGFBP5P24593 272 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 PSMB9P28065 219 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 BMP8BP34820 402 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 CNR2P34972 360 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 BTN3A2P78410 334 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 MRPL28Q13084 256 aaKnown RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 CEACAM7Q14002 265 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 PRSS36Q5K4E3 855 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 TMEM214Q6NUQ4 689 aaKnown RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 ZNF730Q6ZMV8 503 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 SLC29A4Q7RTT9 530 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 SMYD1Q8NB12 490 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 ST13P5Q8NFI4 369 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 TSPAN14Q8NG11 270 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 OR4K1Q8NGD4 311 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 OR52N2Q8NGI0 321 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 OR56A3Q8NH54 315 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 ZNF563Q8TA94 476 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 C9orf43Q8TAL5 461 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 FRS2Q8WU20 508 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 NEIL2Q969S2 332 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 MVB12AQ96EY5 273 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 MMABQ96EY8 250 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 MRGPRX1Q96LB2 322 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 DGAT2Q96PD7 388 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 KCNA7Q96RP8 456 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 C14orf105Q9NVL8 296 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 NXT1Q9UKK6 140 aaKnown RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 GPR37L1O60883 481 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 IGHEP01854 428 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 LINGO3P0C6S8 592 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 SLC19A1P41440 591 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 GRK6P43250 576 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 CHN2P52757 468 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 ADPRHP54922 357 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 RPE65Q16518 533 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 KANK2Q63ZY3 851 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 TMEM184AQ6ZMB5 413 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 ZNF440Q8IYI8 595 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 CARFQ8N187 725 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 TANKQ92844 425 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 DACT3Q96B18 629 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 MAELQ96JY0 434 aaKnown RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 ZSWIM3Q96MP5 696 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 BHLHE41Q9C0J9 482 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 HOXD1Q9GZZ0 328 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 PTGES3LE9PB15 166 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 SCAMP1O15126 338 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 TP73O15350 636 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 AHSA1O95433 338 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 C1orf105O95561 183 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 SDC1P18827 310 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 ACADLP28330 430 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 GCAP28676 217 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 SIM2Q14190 667 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 TYW3Q6IPR3 259 aaKnown RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 LETMD1Q6P1Q0 360 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 USP53Q70EK8 1073 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 TRIM46Q7Z4K8 759 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 GPR78Q96P69 363 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 GFM1Q96RP9 751 aaKnown RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 SORT1Q99523 831 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 MAPKAP1Q9BPZ7 522 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 G6PC3Q9BUM1 346 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 ASIC5Q9NY37 505 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 ACTR10Q9NZ32 417 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 CNOT6Q9ULM6 557 aaKnown RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 HCN4Q9Y3Q4 1203 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 LTBP1Q14766 1721 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 METTL12A8MUP2 240 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 TMCC2O75069 709 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 CCNB2O95067 398 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 GADD45GO95257 159 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 GPR75O95800 540 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 ZNF24P17028 368 aa6.57□□□□□ -1.36
SF3B1-201ENST00000335508 RPS15P62841 145 aaKnown RBP6.57□□□□□ -1.36
SF3B1-201ENST00000335508 ZNF267Q14586 743 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms