RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PLD2O14939 933 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 MYL12BO14950 172 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 CLDN11O75508 207 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 CLDN7O95471 211 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 CHMP24386 653 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 GPC1P35052 558 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 RING1Q06587 406 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 MRPL28Q13084 256 aaKnown RBP13.15□□□□□ -0.3
SYNE3-201ENST00000334258 BOP1Q14137 746 aaKnown RBP13.15□□□□□ -0.3
SYNE3-201ENST00000334258 SLC35F1Q5T1Q4 408 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 C22orf42Q6IC83 251 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 GLCCI1Q86VQ1 547 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 KLHL6Q8WZ60 621 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 UQCC2Q9BRT2 126 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 CNOT2Q9NZN8 540 aaKnown RBP13.15□□□□□ -0.3
SYNE3-201ENST00000334258 VPS29Q9UBQ0 182 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 RAB23Q9ULC3 237 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 GLYATL1P3A0A0U1RQE8 302 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 FAM240BA0A1B0GVZ2 78 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 SH3D21A4FU49 640 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 F11P03951 625 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 LRRC74AQ0VAA2 488 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 GAB1Q13480 694 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 LEXMQ3ZCV2 418 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 DDI2Q5TDH0 399 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 LCN1P1Q5VSP4 162 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 FAM205BPQ63HN1 556 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 KLHL17Q6TDP4 642 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 RNF165Q6ZSG1 346 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 OR4K1Q8NGD4 311 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 NFKBIDQ8NI38 313 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 GPR62Q9BZJ7 368 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 COMMD3Q9UBI1 195 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 STUB1Q9UNE7 303 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 FADS2P1A8MWK0 482 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 ZNF670-ZNF695F2Z2N8 137 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 FAM227AF5H4B4 570 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 MPZL2O60487 215 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 ANXA4P09525 319 aaPredicted RBP13.15□□□□□ -0.3
SYNE3-201ENST00000334258 FOSL1P15407 271 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 ATF4P18848 351 aaPredicted RBP13.15□□□□□ -0.3
SYNE3-201ENST00000334258 CBLP22681 906 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 PSMA3P25788 255 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 PTX3P26022 381 aaPredicted RBP13.15□□□□□ -0.3
SYNE3-201ENST00000334258 CRISP1P54107 249 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 C19orf57Q0VDD7 668 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 NFE2L1Q14494 772 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 GPR19Q15760 415 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 XKR6Q5GH73 641 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 TOR1AIP1Q5JTV8 583 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 SAXO2Q658L1 398 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 FRMPD2BQ6IN97 320 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 XKRXQ6PP77 449 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 TAS1R1Q7RTX1 841 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.3
SYNE3-201ENST00000334258 ZNF557Q8N988 423 aaPredicted RBP13.15□□□□□ -0.3
SYNE3-201ENST00000334258 ATP6V1C2Q8NEY4 427 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 ANGPTL6Q8NI99 470 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 C1GALT1C1Q96EU7 318 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 MYO19Q96H55 970 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 MAPKAP1Q9BPZ7 522 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 KCTD5Q9NXV2 234 aa13.15□□□□□ -0.3
SYNE3-201ENST00000334258 A0A0B4J293 547 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 GABRR3A8MPY1 467 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 IGLV3-27P01718 113 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 POLR2CP19387 275 aaPredicted RBP13.14□□□□□ -0.31
SYNE3-201ENST00000334258 RPS3P23396 243 aaKnown RBP eCLIP13.14□□□□□ -0.31
SYNE3-201ENST00000334258 ACRV1P26436 265 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 CSTF2P33240 577 aaKnown RBP eCLIP13.14□□□□□ -0.31
SYNE3-201ENST00000334258 PCGF2P35227 344 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 GZMKP49863 264 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 SGSHP51688 502 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 DSTNP60981 165 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 CYP4F8P98187 520 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 COX20Q5RI15 118 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 NCEH1Q6PIU2 408 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 PRSS55Q6UWB4 352 aaPredicted RBP13.14□□□□□ -0.31
SYNE3-201ENST00000334258 USP30Q70CQ3 517 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 NPAS3Q8IXF0 933 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 RDH10Q8IZV5 341 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 FAM46DQ8NEK8 389 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 RNF31Q96EP0 1072 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 UROC1Q96N76 676 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 AIFM2Q9BRQ8 373 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 RDH14Q9HBH5 336 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 DNAJC11Q9NVH1 559 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 NLKQ9UBE8 527 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 TMPRSS11EQ9UL52 423 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 CORO2BQ9UQ03 480 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 MAP4K5Q9Y4K4 846 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 BNIP3LO60238 219 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 DPM1O60762 260 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 CSO75390 466 aaKnown RBP13.14□□□□□ -0.31
SYNE3-201ENST00000334258 GASTP01350 101 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 PPIBP23284 216 aaKnown RBP13.14□□□□□ -0.31
SYNE3-201ENST00000334258 GKP32189 559 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 ATP5C1P36542 298 aaKnown RBP13.14□□□□□ -0.31
SYNE3-201ENST00000334258 SCARB2Q14108 478 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 C19orf48Q6RUI8 117 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 LRRC70Q7Z2Q7 622 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms