RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 EGFL8Q99944 293 aa17.48■□□□□ 0.39
SOCS3-201ENST00000330871 ACPTQ9BZG2 426 aa17.48■□□□□ 0.39
SOCS3-201ENST00000330871 CLEC4MQ9H2X3 399 aaPredicted RBP17.48■□□□□ 0.39
SOCS3-201ENST00000330871 SH3BP4Q9P0V3 963 aa17.48■□□□□ 0.39
SOCS3-201ENST00000330871 TRIP12Q14669 1992 aaPredicted RBP17.47■□□□□ 0.39
SOCS3-201ENST00000330871 PRR23AA6NEV1 266 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 GPR182O15218 404 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 IFNA7P01567 189 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 IL1AP01583 271 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 ACPPP15309 386 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 RAB14P61106 215 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 PCDH1Q08174 1060 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 ZNF273Q14593 569 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 ERICH5Q6P6B1 374 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 CLECL1Q8IZS7 167 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 OR8K5Q8NH50 307 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 POF1BQ8WVV4 589 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 PIH1D2Q8WWB5 315 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 NELL2Q99435 816 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 KATNB1Q9BVA0 655 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 BPIFA1Q9NP55 256 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 IFT46Q9NQC8 304 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 ADARB2Q9NS39 739 aaKnown RBP17.47■□□□□ 0.39
SOCS3-201ENST00000330871 SNX11Q9Y5W9 270 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 TRAV6A0A075B6T7 132 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 MANBAO00462 879 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 ANXA8P13928 327 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 CXCL3P19876 107 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 CTBP2P56545 445 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 RPL6Q02878 288 aaKnown RBP17.47■□□□□ 0.39
SOCS3-201ENST00000330871 UGT8Q16880 541 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 COL28A1Q2UY09 1125 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 LGALSLQ3ZCW2 172 aaPredicted RBP17.47■□□□□ 0.39
SOCS3-201ENST00000330871 MS4A13Q5J8X5 152 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 SBSNQ6UWP8 590 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 HSDL2Q6YN16 418 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 WDR53Q7Z5U6 358 aaPredicted RBP17.47■□□□□ 0.39
SOCS3-201ENST00000330871 OR6M1Q8NGM8 313 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 TMEM43Q9BTV4 400 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 KCMF1Q9P0J7 381 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 PLXNB2O15031 1838 aa17.47■□□□□ 0.39
SOCS3-201ENST00000330871 TMEM229AB2RXF0 380 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 ACSM4P0C7M7 580 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 ATF6P18850 670 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 PTPRRQ15256 657 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 MICAQ29983 383 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 ASB18Q6ZVZ8 466 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 SPATA2LQ8IUW3 424 aaPredicted RBP17.46■□□□□ 0.39
SOCS3-201ENST00000330871 TAGAPQ8N103 731 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 CLDN22Q8N7P3 220 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 DNAJB8Q8NHS0 232 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 CDC26Q8NHZ8 85 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 KIAA1143Q96AT1 154 aaPredicted RBP17.46■□□□□ 0.39
SOCS3-201ENST00000330871 HRH3Q9Y5N1 445 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 ACTL7AQ9Y615 435 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 C17orf102A2RUQ5 167 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 QSOX1O00391 747 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 HLA-DQB1P01920 261 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 AVPR1BP47901 424 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 TPMTP51580 245 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 TBX4P57082 545 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 GPR142Q7Z601 462 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 THEM5Q8N1Q8 247 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 GIMAP1Q8WWP7 306 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 KLHL6Q8WZ60 621 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 C1GALT1C1Q96EU7 318 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 EBPLQ9BY08 206 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 RANBP3Q9H6Z4 567 aaPredicted RBP17.46■□□□□ 0.39
SOCS3-201ENST00000330871 NLE1Q9NVX2 485 aaPredicted RBP17.46■□□□□ 0.39
SOCS3-201ENST00000330871 SLCO1C1Q9NYB5 712 aa17.46■□□□□ 0.39
SOCS3-201ENST00000330871 FAM227AF5H4B4 570 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 ADAMDEC1O15204 470 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 RAMP2O60895 175 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 NCR1O76036 304 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 HLA-EP13747 358 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 GANABQ14697 944 aaKnown RBP17.45■□□□□ 0.38
SOCS3-201ENST00000330871 ZRANB3Q5FWF4 1079 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 ANKRD53Q8N9V6 530 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 NELL1Q92832 810 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 UCN3Q969E3 161 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 USB1Q9BQ65 265 aaKnown RBP17.45■□□□□ 0.38
SOCS3-201ENST00000330871 CUEDC1Q9NWM3 386 aaPredicted RBP17.45■□□□□ 0.38
SOCS3-201ENST00000330871 ST3GAL5Q9UNP4 418 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 PCDHGB7Q9Y5F8 929 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 MAGEB17A8MXT2 336 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 LINC01387J3KSC0 135 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 CBX4O00257 560 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 LGI1O95970 557 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 IGFBP1P08833 259 aaPredicted RBP17.45■□□□□ 0.38
SOCS3-201ENST00000330871 SDC1P18827 310 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 GJA5P36382 358 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 ZNF235Q14590 738 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 SF3A2Q15428 464 aaKnown RBP17.45■□□□□ 0.38
SOCS3-201ENST00000330871 LEXMQ3ZCV2 418 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 PRAMEF19Q5SWL8 479 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 BHLHB9Q6PI77 547 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 RTL4Q6ZR62 310 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 TRIM46Q7Z4K8 759 aa17.45■□□□□ 0.38
SOCS3-201ENST00000330871 DDX53Q86TM3 631 aaKnown RBP17.45■□□□□ 0.38
SOCS3-201ENST00000330871 SGTBQ96EQ0 304 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms