RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 HNF1BP35680 557 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 NSG1P42857 185 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 XCR1P46094 333 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 TRIQKQ629K1 86 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 CXorf57Q6NSI4 855 aaKnown RBP17.12■□□□□ 0.33
PRKCB-202ENST00000321728 PHC2Q8IXK0 858 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 HJURPQ8NCD3 748 aaPredicted RBP17.12■□□□□ 0.33
PRKCB-202ENST00000321728 TTC9Q92623 222 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 P2RY13Q9BPV8 354 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 GPATCH2Q9NW75 528 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 TXNL4BQ9NX01 149 aaKnown RBP17.12■□□□□ 0.33
PRKCB-202ENST00000321728 NDRG2Q9UN36 371 aaKnown RBP17.12■□□□□ 0.33
PRKCB-202ENST00000321728 SPEF1Q9Y4P9 236 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 NINQ8N4C6 2090 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 K7ERQ8 282 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 SPAM1P38567 509 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 MAP2K3P46734 347 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 HNMTP50135 292 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 MGAT3Q09327 533 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 DUSP4Q13115 394 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 GLB1LQ6UWU2 654 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 ANKS3Q6ZW76 656 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 BCDIN3DQ7Z5W3 292 aaKnown RBP17.11■□□□□ 0.33
PRKCB-202ENST00000321728 LIX1LQ8IVB5 337 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 TRIM45Q9H8W5 580 aaPredicted RBP17.11■□□□□ 0.33
PRKCB-202ENST00000321728 MALT1Q9UDY8 824 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 PLEKHB1Q9UF11 243 aaPredicted RBP17.11■□□□□ 0.33
PRKCB-202ENST00000321728 ACSL6Q9UKU0 697 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 DNMT3AQ9Y6K1 912 aaPredicted RBP17.11■□□□□ 0.33
PRKCB-202ENST00000321728 C1QBP02746 253 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 IGFBP1P08833 259 aaPredicted RBP17.11■□□□□ 0.33
PRKCB-202ENST00000321728 CYP2A6P11509 494 aaPredicted RBP17.11■□□□□ 0.33
PRKCB-202ENST00000321728 CD22P20273 847 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 MAN2A2P49641 1150 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 TARDBPQ13148 414 aaKnown RBP eCLIP17.11■□□□□ 0.333e-7■■■■□ 20.9
PRKCB-202ENST00000321728 TNK1Q13470 666 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 TIGD3Q6B0B8 471 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 USP30Q70CQ3 517 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 SERINC5Q86VE9 423 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 AMIGO1Q86WK6 493 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 OR4M1Q8NGD0 313 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 NIPAL2Q9H841 368 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 ATP13A2Q9NQ11 1180 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 RAB23Q9ULC3 237 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 TMCC3Q9ULS5 477 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 MAP4K5Q9Y4K4 846 aa17.11■□□□□ 0.33
PRKCB-202ENST00000321728 H3BN98 237 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 TSC22D2O75157 780 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 IL1AP01583 271 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 C8GP07360 202 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 MSL3P1P0C860 447 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 SLC2A2P11168 524 aaPredicted RBP17.1■□□□□ 0.33
PRKCB-202ENST00000321728 IDSP22304 550 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 PRKACBP22694 351 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 SDC2P34741 201 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 GPR33Q49SQ1 333 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 ZNF767PQ75MW2 155 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 LAS2Q8IYD9 372 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 NANOGP1Q8N7R0 232 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 MSLNLQ96KJ4 702 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 GFM1Q96RP9 751 aaKnown RBP17.1■□□□□ 0.33
PRKCB-202ENST00000321728 SLC35A5Q9BS91 424 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 MAT2BQ9NZL9 334 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 C2orf78A6NCI8 922 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 TNFRSF21O75509 655 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 ZDHHC11BP0C7U3 371 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 APEX1P27695 318 aaKnown RBP17.1■□□□□ 0.33
PRKCB-202ENST00000321728 ASMTP46597 345 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 LIMS1P48059 325 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 GATMP50440 423 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 HBA1P69905 142 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 NCF4Q15080 339 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 MEDAGQ5VYS4 303 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 ADNP2Q6IQ32 1131 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 VRK3Q8IV63 474 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 NATD1Q8N6N6 113 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 NELL2Q99435 816 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 PKP4Q99569 1192 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 RETREG1Q9H6L5 497 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 NLKQ9UBE8 527 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 ENPP4Q9Y6X5 453 aa17.1■□□□□ 0.33
PRKCB-202ENST00000321728 FAM240BA0A1B0GVZ2 78 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 TRBC2A0A5B9 178 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 MTMR11A4FU01 709 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 SEC14L5O43304 696 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 ETHE1O95571 254 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 C1SP09871 688 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 NAT1P18440 290 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 MVDP53602 400 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 CDK6Q00534 326 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 ZNF91Q05481 1191 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 MLLT11Q13015 90 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-202ENST00000321728 TAF1CQ15572 869 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-202ENST00000321728 MFSD14CQ5VZR4 134 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 CASP12Q6UXS9 341 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 RSPO2Q6UXX9 243 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-202ENST00000321728 TMIGD1Q6UXZ0 262 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 CHST9Q7L1S5 443 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 ABI3BPQ7Z7G0 1075 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 CLDN22Q8N7P3 220 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms