RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 FAM181AQ8N9Y4 354 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 GPR151Q8TDV0 419 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 CIDECQ96AQ7 238 aaPredicted RBP18.26■□□□□ 0.51
RTN4-201ENST00000317610 SAMD11Q96NU1 681 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 SRRQ9GZT4 340 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 RC3H2Q9HBD1 1191 aaKnown RBP18.26■□□□□ 0.51
RTN4-201ENST00000317610 LSM7Q9UK45 103 aaKnown RBP18.26■□□□□ 0.51
RTN4-201ENST00000317610 ZNF670-ZNF695F2Z2N8 137 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 ADAP00813 363 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 CATP04040 527 aaKnown RBP18.25■□□□□ 0.51
RTN4-201ENST00000317610 ITGB7P26010 798 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 RORCP51449 518 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 DCDC1P59894 354 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 PSPHP78330 225 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 SLC5A12Q1EHB4 618 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 KIAA1841Q6NSI8 718 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 TMPRSS11AQ6ZMR5 421 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 HTR3DQ70Z44 454 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 OTOP2Q7RTS6 562 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 TRIM69Q86WT6 500 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 APOBEC4Q8WW27 367 aaKnown RBP18.25■□□□□ 0.51
RTN4-201ENST00000317610 REPS1Q96D71 796 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 PKP4Q99569 1192 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 WRAP53Q9BUR4 548 aaKnown RBP18.25■□□□□ 0.51
RTN4-201ENST00000317610 ZDHHC6Q9H6R6 413 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 RMI1Q9H9A7 625 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 IL21Q9HBE4 155 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 REV1Q9UBZ9 1251 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 TMEM98Q9Y2Y6 226 aa18.25■□□□□ 0.51
RTN4-201ENST00000317610 TLR4O00206 839 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 FOXE1O00358 373 aaPredicted RBP18.24■□□□□ 0.51
RTN4-201ENST00000317610 SCO2O43819 266 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 CSO75390 466 aaKnown RBP18.24■□□□□ 0.51
RTN4-201ENST00000317610 SLC16A8O95907 504 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 ELNP15502 786 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 BDKRB1P46663 353 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 RPS5P46782 204 aaKnown RBP18.24■□□□□ 0.51
RTN4-201ENST00000317610 NCF4Q15080 339 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 LRRC73Q5JTD7 316 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 ARMCX6Q7L4S7 300 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 COMMD6Q7Z4G1 85 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 HS6ST3Q8IZP7 471 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 PPCDCQ96CD2 204 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 FAM83DQ9H4H8 585 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 MYNNQ9NPC7 610 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 STUB1Q9UNE7 303 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 MAP4K5Q9Y4K4 846 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 COL4A6Q14031 1691 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 IQCMA0A1B0GVH7 501 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 H3BM21 787 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 BNIP3LO60238 219 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 KLHL18O94889 574 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 POP4O95707 220 aaKnown RBP18.24■□□□□ 0.51
RTN4-201ENST00000317610 IFNW1P05000 195 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 CXCR2P25025 360 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 BAK1Q16611 211 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 ZFP69Q49AA0 526 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 FAM71E1Q6IPT2 247 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 DPY19L3Q6ZPD9 716 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 FAM92BQ6ZTR7 304 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 KLHL6Q8WZ60 621 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 FOXJ1Q92949 421 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 SCAMP4Q969E2 229 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 NEIL2Q969S2 332 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 WDR34Q96EX3 536 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 TMEM80Q96HE8 168 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 TRIM39Q9HCM9 518 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 EXOSC4Q9NPD3 245 aaKnown RBP18.24■□□□□ 0.51
RTN4-201ENST00000317610 KCNE2Q9Y6J6 123 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 TET1Q8NFU7 2136 aa18.24■□□□□ 0.51
RTN4-201ENST00000317610 DOCK6Q96HP0 2047 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 HMX3A6NHT5 357 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 OR2AG2A6NM03 316 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 FFAR1O14842 300 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 IL7P13232 177 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 OSMP13725 252 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 ZNF30P17039 623 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 CHI3L1P36222 383 aaPredicted RBP18.23■□□□□ 0.51
RTN4-201ENST00000317610 SOX3P41225 446 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 MC1RQ01726 317 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 ILKQ13418 452 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 CDK10Q15131 360 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 SPHARQ15513 63 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 ARMC4Q5T2S8 1044 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 C16orf78Q8WTQ4 265 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 TRMT61AQ96FX7 289 aaKnown RBP18.23■□□□□ 0.51
RTN4-201ENST00000317610 IGSF21Q96ID5 467 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 GPBP1L1Q9HC44 474 aaPredicted RBP18.23■□□□□ 0.51
RTN4-201ENST00000317610 NDUFB11Q9NX14 153 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 RAB23Q9ULC3 237 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.23■□□□□ 0.51
RTN4-201ENST00000317610 SLC5A10A0PJK1 596 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 HYKKA2RU49 373 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 A6NL46 340 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 QSOX1O00391 747 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 RGS5O15539 181 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 MFN2O95140 757 aa18.23■□□□□ 0.51
RTN4-201ENST00000317610 PSMA1P25786 263 aaKnown RBP18.23■□□□□ 0.51
RTN4-201ENST00000317610 PUM1Q14671 1186 aaKnown RBP eCLIP18.23■□□□□ 0.513e-8■□□□□ 8.3
RTN4-201ENST00000317610 CLPPQ16740 277 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms