RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ZNF300Q96RE9 604 aaPredicted RBP11.02□□□□□ -0.65
PTPN2-201ENST00000309660 C17orf62Q9BQA9 187 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 GABARAPL1Q9H0R8 117 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 TMEM245Q9H330 911 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 DPEP2Q9H4A9 486 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 MYNNQ9NPC7 610 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 FZD3Q9NPG1 666 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 CTPS2Q9NRF8 586 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 C1GALT1Q9NS00 363 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 AHSPQ9NZD4 102 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 SERGEFQ9UGK8 458 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 DUSP12Q9UNI6 340 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 RNF6Q9Y252 685 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 ANGPT4Q9Y264 503 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 PCDHGA6Q9Y5G7 932 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 REV3LO60673 3130 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 OR52A4PA6NMU1 304 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 VEGFDO43915 354 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 PRKRAO75569 313 aaKnown RBP11.02□□□□□ -0.65
PTPN2-201ENST00000309660 ERAL1O75616 437 aaKnown RBP11.02□□□□□ -0.65
PTPN2-201ENST00000309660 KAT7O95251 611 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 GADD45GO95257 159 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 SEMG1P04279 462 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 CD36P16671 472 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 SOX9P48436 509 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 PDGFRLQ15198 375 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 MOGQ16653 247 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 HCAR2Q8TDS4 363 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 YIPF4Q9BSR8 244 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 GPN2Q9H9Y4 310 aaPredicted RBP11.02□□□□□ -0.65
PTPN2-201ENST00000309660 SLAMF7Q9NQ25 335 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 KLHL20Q9Y2M5 609 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 HELZP42694 1942 aaKnown RBP11.02□□□□□ -0.65
PTPN2-201ENST00000309660 LOC100506127A0A0U1RQW1 187 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 PRAMEF25A6NGN4 478 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 WBP4O75554 376 aaKnown RBP11.01□□□□□ -0.65
PTPN2-201ENST00000309660 KRT75O95678 551 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 CD6P30203 668 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 CTSKP43235 329 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 CTF1Q16619 201 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 ADPRMQ3LIE5 342 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 KHDRBS2Q5VWX1 349 aaKnown RBP11.01□□□□□ -0.65
PTPN2-201ENST00000309660 FBXO46Q6PJ61 603 aaPredicted RBP11.01□□□□□ -0.65
PTPN2-201ENST00000309660 DEF8Q6ZN54 512 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 CAMKMTQ7Z624 323 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 C11orf74Q86VG3 221 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 LRRC56Q8IYG6 542 aaPredicted RBP11.01□□□□□ -0.65
PTPN2-201ENST00000309660 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTPN2-201ENST00000309660 KXD1Q9BQD3 176 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 TEX10Q9NXF1 929 aaPredicted RBP11.01□□□□□ -0.65
PTPN2-201ENST00000309660 GPR83Q9NYM4 423 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 DPP7Q9UHL4 492 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 GPR34Q9UPC5 381 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 PLEKHM1Q9Y4G2 1056 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 PTPRSQ13332 1948 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 TMEM229AB2RXF0 380 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 SOX14O95416 240 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 RPL3P39023 403 aaKnown RBP11.01□□□□□ -0.65
PTPN2-201ENST00000309660 PROX2Q3B8N5 592 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 LEXMQ3ZCV2 418 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 IQCCQ4KMZ1 466 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 FAHD1Q6P587 224 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 PGBD3Q8N328 593 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 SVOPQ8N4V2 548 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 HORMAD2Q8N7B1 307 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 AMER3Q8N944 861 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 AQP11Q8NBQ7 271 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 XAGE5Q8WWM1 108 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 EPYCQ99645 322 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 SLC6A17Q9H1V8 727 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 DUSP21Q9H596 190 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 ACOT13Q9NPJ3 140 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 SLC6A14Q9UN76 642 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 WDR37Q9Y2I8 494 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 PADI2Q9Y2J8 665 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 MYO10Q9HD67 2058 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 CKAP5Q14008 2032 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 C17orf113A0A1B0GUU1 675 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 PDPK1O15530 556 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 OCM2P0CE71 109 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 OCMP0CE72 109 aaPredicted RBP11.01□□□□□ -0.65
PTPN2-201ENST00000309660 EN2P19622 333 aaPredicted RBP11.01□□□□□ -0.65
PTPN2-201ENST00000309660 GJA4P35212 333 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 TIE1P35590 1138 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 SSR2P43308 183 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 FCHO2Q0JRZ9 810 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 EIF4HQ15056 248 aaKnown RBP11.01□□□□□ -0.65
PTPN2-201ENST00000309660 MAPK11Q15759 364 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 GAB4Q2WGN9 574 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 ZNF658BQ4V348 819 aaPredicted RBP11.01□□□□□ -0.65
PTPN2-201ENST00000309660 C2orf27AQ580R0 203 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 DEPDC1Q5TB30 811 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 VITQ6UXI7 678 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 RD3Q7Z3Z2 195 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 ZNF605Q86T29 641 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 ADGRF3Q8IZF5 1079 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 STX19Q8N4C7 294 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 FBXO15Q8NCQ5 510 aaPredicted RBP11.01□□□□□ -0.65
PTPN2-201ENST00000309660 CXorf40BQ96DE9 158 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 FAM83CQ9BQN1 747 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms