RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 MBLAC2Q68D91 279 aa11.92□□□□□ -0.5
ABCA3-201ENST00000301732 FBXL22Q6P050 247 aa11.92□□□□□ -0.5
ABCA3-201ENST00000301732 ZNF773Q6PK81 442 aa11.92□□□□□ -0.5
ABCA3-201ENST00000301732 MARVELD2Q8N4S9 558 aa11.92□□□□□ -0.5
ABCA3-201ENST00000301732 ZNF283Q8N7M2 679 aa11.92□□□□□ -0.5
ABCA3-201ENST00000301732 CPT1CQ8TCG5 803 aa11.92□□□□□ -0.5
ABCA3-201ENST00000301732 SMIM3Q9BZL3 60 aa11.92□□□□□ -0.5
ABCA3-201ENST00000301732 DLGAP4Q9Y2H0 992 aa11.92□□□□□ -0.5
ABCA3-201ENST00000301732 NRXN1Q9ULB1 1477 aa11.92□□□□□ -0.5
ABCA3-201ENST00000301732 ZNF705FA8MVS1 300 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 RTCAO00442 366 aaKnown RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 CASC3O15234 703 aaKnown RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 ZNF705DP0CH99 300 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 ZNF705BP0CI00 300 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 CSNK2A2P19784 350 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 FXYD4P59646 89 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 ZNF792Q3KQV3 632 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 LRIT3Q3SXY7 679 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 NANOGP8Q6NSW7 305 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 RIT1Q92963 219 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 SNX27Q96L92 541 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 SECISBP2Q96T21 854 aaKnown RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 NANOGQ9H9S0 305 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 WNT6Q9Y6F9 365 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 TCHHQ07283 1943 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 RNF17Q9BXT8 1623 aaKnown RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 ZNF705GA8MUZ8 300 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 NRP1O14786 923 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 UBXN7O94888 489 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 AHSA1O95433 338 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 C8AP07357 584 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 IRF5Q13568 498 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 GRM2Q14416 872 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 SEC23BQ15437 767 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 C7orf61Q8IZ16 206 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 RGMAQ96B86 450 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 TESCQ96BS2 214 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 IL17FQ96PD4 163 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 PRDM16Q9HAZ2 1276 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 ENY2Q9NPA8 101 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 CLTCQ00610 1675 aaKnown RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 POLR2CP19387 275 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 ARSFP54793 590 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 IL10RBQ08334 325 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 ECH1Q13011 328 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 PMS2P3Q13401 168 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 CHRFAM7AQ494W8 412 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 CD99L2Q8TCZ2 262 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 MMABQ96EY8 250 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 PIP5K1AQ99755 562 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 SLC32A1Q9H598 525 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 METTL7AQ9H8H3 244 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 IL21RQ9HBE5 538 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 CALML5Q9NZT1 146 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 OR6C75A6NL08 312 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 KNG1P01042 644 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 FASLGP48023 281 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 TUBA1BP68363 451 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 TUBA1AQ71U36 451 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 NUDT13Q86X67 352 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 TDRPQ86YL5 185 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 HS3ST5Q8IZT8 346 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 BEST4Q8NFU0 473 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 NLGN2Q8NFZ4 835 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 FCRL3Q96P31 734 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 PEBP4Q96S96 227 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 TFB2MQ9H5Q4 396 aaKnown RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 ZNF850A8MQ14 1090 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 UBFD1O14562 309 aaKnown RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 OXSR1O95747 527 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 EDN3P14138 238 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 OXTRP30559 389 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 ZNF674Q2M3X9 581 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 ZC3H14Q6PJT7 736 aaKnown RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 HHIPQ96QV1 700 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 RAD9AQ99638 391 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 PCDHGB7Q9Y5F8 929 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 TMEM150CB9EJG8 249 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 PCDH17O14917 1159 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 OPN1LWP04000 364 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 RPS26P11Q5JNZ5 115 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 GPRC6AQ5T6X5 926 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 DUS1LQ6P1R4 473 aaKnown RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 TMEM107Q6UX40 140 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 ZNF761Q86XN6 746 aaPredicted RBP11.91□□□□□ -0.5
ABCA3-201ENST00000301732 FBXO27Q8NI29 283 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 SCGB1C1Q8TD33 95 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 FRS2Q8WU20 508 aa11.91□□□□□ -0.5
ABCA3-201ENST00000301732 URB1O60287 2271 aaKnown RBP11.9□□□□□ -0.5
ABCA3-201ENST00000301732 HTR3EA5X5Y0 456 aa11.9□□□□□ -0.5
ABCA3-201ENST00000301732 AQP12BA6NM10 295 aa11.9□□□□□ -0.5
ABCA3-201ENST00000301732 LRRN3E7EW58 273 aa11.9□□□□□ -0.5
ABCA3-201ENST00000301732 H2AFB2P0C5Z0 115 aa11.9□□□□□ -0.5
ABCA3-201ENST00000301732 GSTT2P0CG29 244 aa11.9□□□□□ -0.5
ABCA3-201ENST00000301732 ARL2P36404 184 aa11.9□□□□□ -0.5
ABCA3-201ENST00000301732 CLRN1P58418 232 aa11.9□□□□□ -0.5
ABCA3-201ENST00000301732 TUBA4AP68366 448 aa11.9□□□□□ -0.5
ABCA3-201ENST00000301732 ZNF791Q3KP31 576 aaPredicted RBP11.9□□□□□ -0.5
ABCA3-201ENST00000301732 AQP12AQ8IXF9 295 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms