RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ACRV1P26436 265 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 EVI2BP34910 448 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 CRYBB2P43320 205 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 RAB8AP61006 207 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 TAF12Q16514 161 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 GLB1LQ6UWU2 654 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 CDH24Q86UP0 819 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 GHDCQ8N2G8 530 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 OR4M1Q8NGD0 313 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 TMEM80Q96HE8 168 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 TBC1D17Q9HA65 648 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 TXNL4BQ9NX01 149 aaKnown RBP14.04□□□□□ -0.16
COL6A2-201ENST00000300527 ASIC5Q9NY37 505 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 PCDHB8Q9UN66 801 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 GSAPA4D1B5 854 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 TBL1XO60907 577 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 ETHE1O95571 254 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 HOXB9P17482 250 aaPredicted RBP14.04□□□□□ -0.16
COL6A2-201ENST00000300527 AVPR1BP47901 424 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 VEZF1Q14119 521 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 SPRYD7Q5W111 196 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 TNFAIP8L2Q6P589 184 aaPredicted RBP14.04□□□□□ -0.16
COL6A2-201ENST00000300527 CNIH2Q6PI25 160 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 BPHLQ86WA6 291 aaPredicted RBP14.04□□□□□ -0.16
COL6A2-201ENST00000300527 FAM46DQ8NEK8 389 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 POP5Q969H6 163 aaKnown RBP14.04□□□□□ -0.16
COL6A2-201ENST00000300527 MSANTD3Q96H12 275 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 ZSCAN5AQ9BUG6 496 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 ANKRA2Q9H9E1 313 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 KCTD5Q9NXV2 234 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 MAPRE3Q9UPY8 281 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 CIB4A0PJX0 185 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 WASHC1A8K0Z3 465 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 E7EQ34 232 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 ZNF670-ZNF695F2Z2N8 137 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 KLKB1P03952 638 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 AOAHP28039 575 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 CSTF2P33240 577 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL6A2-201ENST00000300527 HNF1BP35680 557 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 HBA1P69905 142 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 CDK6Q00534 326 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 ZNF91Q05481 1191 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 POU4F3Q15319 338 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 SNAPC1Q16533 368 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 ATP13A5Q4VNC0 1218 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 NCEH1Q6PIU2 408 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 OR52P1PQ8NH57 321 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 WBP2Q969T9 261 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 CDCA4Q9BXL8 241 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 ADARB2Q9NS39 739 aaKnown RBP14.03□□□□□ -0.16
COL6A2-201ENST00000300527 PADI2Q9Y2J8 665 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 TSPAN4O14817 238 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 SMAD6O43541 496 aaKnown RBP14.03□□□□□ -0.16
COL6A2-201ENST00000300527 CLDN11O75508 207 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 ZNF865P0CJ78 1059 aaPredicted RBP14.03□□□□□ -0.16
COL6A2-201ENST00000300527 PRKAR1AP10644 381 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 RPS25P62851 125 aaKnown RBP14.03□□□□□ -0.16
COL6A2-201ENST00000300527 ASAH1Q13510 395 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 GRB14Q14449 540 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 XKRXQ6PP77 449 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 PIP5K1AQ99755 562 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 CDCP1Q9H5V8 836 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 ACER3Q9NUN7 267 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 ZNF224Q9NZL3 707 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 HCSTQ9UBK5 93 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 TRAV6A0A075B6T7 132 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 F11P03951 625 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 RPL17P18621 184 aaKnown RBP14.03□□□□□ -0.16
COL6A2-201ENST00000300527 PBLDP30039 288 aaPredicted RBP14.03□□□□□ -0.16
COL6A2-201ENST00000300527 MLLT3P42568 568 aaPredicted RBP14.03□□□□□ -0.16
COL6A2-201ENST00000300527 SRP54P61011 504 aaKnown RBP14.03□□□□□ -0.16
COL6A2-201ENST00000300527 PURAQ00577 322 aaKnown RBP14.03□□□□□ -0.16
COL6A2-201ENST00000300527 TOR2AQ5JU69 321 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 MZT2BQ6NZ67 158 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 PHC2Q8IXK0 858 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 DHRS9Q9BPW9 319 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 CLEC4AQ9UMR7 237 aa14.03□□□□□ -0.16
COL6A2-201ENST00000300527 OR2AG2A6NM03 316 aa14.02□□□□□ -0.16
COL6A2-201ENST00000300527 C5orf58C9J3I9 102 aa14.02□□□□□ -0.16
COL6A2-201ENST00000300527 IFNW1P05000 195 aa14.02□□□□□ -0.16
COL6A2-201ENST00000300527 DOC2AQ14183 400 aa14.02□□□□□ -0.16
COL6A2-201ENST00000300527 NCF4Q15080 339 aa14.02□□□□□ -0.16
COL6A2-201ENST00000300527 FAM205BPQ63HN1 556 aa14.02□□□□□ -0.16
COL6A2-201ENST00000300527 DNAJC5GQ8N7S2 189 aa14.02□□□□□ -0.16
COL6A2-201ENST00000300527 TMED9Q9BVK6 235 aa14.02□□□□□ -0.16
COL6A2-201ENST00000300527 ATP13A2Q9NQ11 1180 aa14.02□□□□□ -0.16
COL6A2-201ENST00000300527 SCAMP2O15127 329 aaKnown RBP14.02□□□□□ -0.17
COL6A2-201ENST00000300527 POLR1CO15160 346 aaPredicted RBP14.02□□□□□ -0.17
COL6A2-201ENST00000300527 ALAS2P22557 587 aa14.02□□□□□ -0.17
COL6A2-201ENST00000300527 PCGF2P35227 344 aa14.02□□□□□ -0.17
COL6A2-201ENST00000300527 XKP51811 444 aa14.02□□□□□ -0.17
COL6A2-201ENST00000300527 TARDBPQ13148 414 aaKnown RBP eCLIP14.02□□□□□ -0.17
COL6A2-201ENST00000300527 TEAD4Q15561 434 aa14.02□□□□□ -0.17
COL6A2-201ENST00000300527 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.02□□□□□ -0.17
COL6A2-201ENST00000300527 ZNF385BQ569K4 471 aa14.02□□□□□ -0.17
COL6A2-201ENST00000300527 LAPTM4BQ86VI4 370 aa14.02□□□□□ -0.17
COL6A2-201ENST00000300527 RDH10Q8IZV5 341 aa14.02□□□□□ -0.17
COL6A2-201ENST00000300527 NXPE1Q8N323 547 aa14.02□□□□□ -0.17
COL6A2-201ENST00000300527 ART5Q96L15 291 aa14.02□□□□□ -0.17
COL6A2-201ENST00000300527 MND1Q9BWT6 205 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms