RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 LMLNQ96KR4 655 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 WRAP53Q9BUR4 548 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 CCDC32Q9BV29 185 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 ASPNQ9BXN1 380 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 CRNNQ9UBG3 495 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 WBP11Q9Y2W2 641 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 KCNE2Q9Y6J6 123 aa12.66□□□□□ -0.38
SLC28A1-201ENST00000286749 A6NL46 340 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 GPR37L1O60883 481 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 SLITRK5O94991 958 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 RECKO95980 971 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 TGFB1P01137 390 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 CKMT1AP12532 417 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 GJA1P17302 382 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 PDHA2P29803 388 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 RPS19P39019 145 aaKnown RBP12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 FEN1P39748 380 aaKnown RBP12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 GJA8P48165 433 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 HMGA2P52926 109 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 NDUFA5Q16718 116 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 ASTLQ6HA08 431 aaPredicted RBP12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 GAREM2Q75VX8 874 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 MMAAQ8IVH4 418 aaKnown RBP12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 RASGEF1AQ8N9B8 481 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 NEDD4LQ96PU5 975 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 OR2A14Q96R47 310 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 OR51B5Q9H339 312 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 HHATLQ9HCP6 504 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 ENOPH1Q9UHY7 261 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 SLC25A13Q9UJS0 675 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 ZNF221Q9UK13 617 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 A0A075B6Q4 140 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 NRG2O14511 850 aaPredicted RBP12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 AP3D1O14617 1153 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 MPZL2O60487 215 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 IFNA14P01570 189 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 IFNW1P05000 195 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 TIE1P35590 1138 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 PCBP3P57721 371 aaKnown RBP12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 TAS2R50P59544 299 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 MEF2AQ02078 507 aaPredicted RBP12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 SLBPQ14493 270 aaKnown RBP eCLIP12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 DUSP7Q16829 419 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 ATAD3CQ5T2N8 411 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 FAM180BQ6P0A1 224 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 KLHDC8AQ8IYD2 350 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 ZNF784Q8NCA9 323 aaPredicted RBP12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 FAM46DQ8NEK8 389 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 FLCNQ8NFG4 579 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 OR6F1Q8NGZ6 308 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 GPR151Q8TDV0 419 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 C16orf78Q8WTQ4 265 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 BARHL1Q9BZE3 327 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 DYRK4Q9NR20 520 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 TAS2R9Q9NYW1 312 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 DNAJC27Q9NZQ0 273 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 ANGPT4Q9Y264 503 aa12.65□□□□□ -0.38
SLC28A1-201ENST00000286749 PRRC2BQ5JSZ5 2229 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 TRBV4-1A0A0J9YWV2 114 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 IDH3BO43837 385 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 URODP06132 367 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 IGFBP1P08833 259 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 ARAFP10398 606 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 RHCEP18577 417 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 CD72P21854 359 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 VIPR1P32241 457 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 HTR3AP46098 478 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 TBPL1P62380 186 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 POLR2LP62875 67 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 PCDH1Q08174 1060 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 PDE7AQ13946 482 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 RAB33AQ14088 237 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 ZMAT1Q5H9K5 638 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 ZNF544Q6NX49 715 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 UBQLNLQ8IYU4 475 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 ST13P5Q8NFI4 369 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 MRPS31Q92665 395 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 RC3H2Q9HBD1 1191 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 CLEC2DQ9UHP7 191 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 N6AMT1Q9Y5N5 214 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 TLR4O00206 839 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 FFAR1O14842 300 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 RGS13O14921 159 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 ATG13O75143 517 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 KLHL18O94889 574 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 SOX14O95416 240 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 SCG5P05408 212 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 CTSAP10619 480 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 AZGP1P25311 298 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 LIM2P55344 173 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 RPS26P11Q5JNZ5 115 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 ZNF770Q6IQ21 691 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 GATAD2AQ86YP4 633 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 TCEAL8Q8IYN2 117 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 MMP21Q8N119 569 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 ZNF480Q8WV37 535 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 REPS1Q96D71 796 aa12.64□□□□□ -0.39
SLC28A1-201ENST00000286749 TMCO6Q96DC7 493 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms