RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 GPR87Q9BY21 358 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 TUBB1Q9H4B7 451 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 PCDHGA6Q9Y5G7 932 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 DNAJC15Q9Y5T4 150 aa17.32■□□□□ 0.36
SDF4-201ENST00000263741 IGLV3-12A0A075B6K2 115 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 TMEM114B3SHH9 223 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 B3GALT2O43825 422 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 SKAP2O75563 359 aaPredicted RBP17.31■□□□□ 0.36
SDF4-201ENST00000263741 CREG1O75629 220 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 HIST1H1TP22492 207 aaPredicted RBP17.31■□□□□ 0.36
SDF4-201ENST00000263741 OTX2P32243 289 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 FOLR3P41439 243 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 MTTPP55157 894 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 TGM3Q08188 693 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 CUL3Q13618 768 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 AP5B1Q2VPB7 878 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 MINDY4Q4G0A6 757 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 FAAH2Q6GMR7 532 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 OR4C11Q6IEV9 310 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 RIPOR1Q6ZS17 1223 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 FAM47BQ8NA70 645 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 SLC26A1Q9H2B4 701 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 MKKSQ9NPJ1 570 aaPredicted RBP17.31■□□□□ 0.36
SDF4-201ENST00000263741 KLHL14Q9P2G3 628 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 PADI2Q9Y2J8 665 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 TRAF6Q9Y4K3 522 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 NBEAQ8NFP9 2946 aa17.31■□□□□ 0.36
SDF4-201ENST00000263741 CACNA1GO43497 2377 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 VSTM2BA6NLU5 285 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 BMP10O95393 424 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 ALBP02768 609 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 BSGP35613 385 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 SERPINB5P36952 375 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 CXADRP78310 365 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 BTKQ06187 659 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 RIPK1Q13546 671 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 OR2Y1Q8NGV0 311 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 TWIST2Q8WVJ9 160 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 SERINC2Q96SA4 455 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 MAPKAP1Q9BPZ7 522 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 CENPKQ9BS16 269 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 TBCDQ9BTW9 1192 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 CRB3Q9BUF7 120 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 WDR54Q9H977 334 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 BRF2Q9HAW0 419 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 ATMQ13315 3056 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 CDC14CA4D256 554 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 TMPRSS11DO60235 418 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 B4GALT2O60909 372 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 PRKRAO75569 313 aaKnown RBP17.3■□□□□ 0.36
SDF4-201ENST00000263741 UBOX5O94941 541 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 ATP6V1G2O95670 118 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 JUNP05412 331 aaKnown RBP17.3■□□□□ 0.36
SDF4-201ENST00000263741 GRK2P25098 689 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 HNRNPFP52597 415 aaKnown RBP17.3■□□□□ 0.36
SDF4-201ENST00000263741 SKP1P63208 163 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 GALNT1Q10472 559 aaPredicted RBP17.3■□□□□ 0.36
SDF4-201ENST00000263741 CSTF3Q12996 717 aaKnown RBP17.3■□□□□ 0.36
SDF4-201ENST00000263741 C1orf52Q8N6N3 182 aaKnown RBP17.3■□□□□ 0.36
SDF4-201ENST00000263741 TMEM52Q8NDY8 209 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 SRFBP1Q8NEF9 429 aaKnown RBP17.3■□□□□ 0.36
SDF4-201ENST00000263741 OR2T11Q8NH01 316 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 APIPQ96GX9 242 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 FBXW2Q9UKT8 454 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 MKL2Q9ULH7 1088 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 PPT2Q9UMR5 302 aa17.3■□□□□ 0.36
SDF4-201ENST00000263741 ARHGAP10A1A4S6 786 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 PIP5K1BO14986 540 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 LINC00032P0C843 101 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 LIM2P55344 173 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 TMPRSS3P57727 454 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 TBL3Q12788 808 aaKnown RBP17.29■□□□□ 0.36
SDF4-201ENST00000263741 UGT3A2Q3SY77 523 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 C10orf62Q5T681 223 aaPredicted RBP17.29■□□□□ 0.36
SDF4-201ENST00000263741 WLSQ5T9L3 541 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 COMMD6Q7Z4G1 85 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 DDIASQ8IXT1 998 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 PPP1R36Q96LQ0 422 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 MYCBPQ99417 103 aaPredicted RBP17.29■□□□□ 0.36
SDF4-201ENST00000263741 MANSC1Q9H8J5 431 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 VPS29Q9UBQ0 182 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 GIMAP2Q9UG22 337 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 C3orf18Q9UK00 162 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 CACNA1BQ00975 2339 aa17.29■□□□□ 0.36
SDF4-201ENST00000263741 A0A088AWK7 358 aa17.28■□□□□ 0.36
SDF4-201ENST00000263741 IDSB3KWA1 339 aa17.28■□□□□ 0.36
SDF4-201ENST00000263741 SEMA3DO95025 777 aa17.28■□□□□ 0.36
SDF4-201ENST00000263741 KLK1P06870 262 aa17.28■□□□□ 0.36
SDF4-201ENST00000263741 RNH1P13489 461 aaKnown RBP17.28■□□□□ 0.36
SDF4-201ENST00000263741 ZNF10P21506 573 aaPredicted RBP17.28■□□□□ 0.36
SDF4-201ENST00000263741 SF3A3Q12874 501 aaKnown RBP eCLIP17.28■□□□□ 0.365e-6■■■■■ 35.2
SDF4-201ENST00000263741 SLAMF1Q13291 335 aa17.28■□□□□ 0.36
SDF4-201ENST00000263741 PDCD2Q16342 344 aaPredicted RBP17.28■□□□□ 0.36
SDF4-201ENST00000263741 IMPG1Q17R60 797 aa17.28■□□□□ 0.36
SDF4-201ENST00000263741 NUDT13Q86X67 352 aa17.28■□□□□ 0.36
SDF4-201ENST00000263741 EFCAB3Q8N7B9 438 aa17.28■□□□□ 0.36
SDF4-201ENST00000263741 AMER2Q8N7J2 671 aa17.28■□□□□ 0.36
SDF4-201ENST00000263741 TBC1D20Q96BZ9 403 aa17.28■□□□□ 0.36
SDF4-201ENST00000263741 EFHD1Q9BUP0 239 aa17.28■□□□□ 0.36
SDF4-201ENST00000263741 EBPLQ9BY08 206 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms