RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 CASP9P55211 416 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 CDH4P55283 916 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 NFATC2Q13469 925 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 GAB1Q13480 694 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 LIPKQ5VXJ0 399 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 LINGO4Q6UY18 593 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 LRRC70Q7Z2Q7 622 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 MRPL10Q7Z7H8 261 aaKnown RBP14.34□□□□□ -0.11
XRCC1-201ENST00000262887 DDX53Q86TM3 631 aaKnown RBP14.34□□□□□ -0.11
XRCC1-201ENST00000262887 FAM46DQ8NEK8 389 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 LHFPL5Q8TAF8 219 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 PIH1D2Q8WWB5 315 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 FUBP3Q96I24 572 aaKnown RBP eCLIP14.34□□□□□ -0.11
XRCC1-201ENST00000262887 DCLRE1CQ96SD1 692 aaKnown RBP14.34□□□□□ -0.11
XRCC1-201ENST00000262887 TM9SF2Q99805 663 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 PAK6Q9NQU5 681 aaPredicted RBP14.34□□□□□ -0.11
XRCC1-201ENST00000262887 NLKQ9UBE8 527 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 PCDHB8Q9UN66 801 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 HBQ1P09105 142 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 SRCP12931 536 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 ITGALP20701 1170 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 GRB14Q14449 540 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 GANABQ14697 944 aaKnown RBP14.34□□□□□ -0.11
XRCC1-201ENST00000262887 MEDAGQ5VYS4 303 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 PHC2Q8IXK0 858 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 GPC2Q8N158 579 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 C9orf62Q8N4C0 152 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 ZBED6CLQ96FA7 236 aaPredicted RBP14.34□□□□□ -0.11
XRCC1-201ENST00000262887 KATNAL1Q9BW62 490 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 RERGLQ9H628 205 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 ANKRA2Q9H9E1 313 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 C11orf16Q9NQ32 467 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 CRLS1Q9UJA2 301 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 TMCC3Q9ULS5 477 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 PLXNA3P51805 1871 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 C1orf226A1L170 272 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 GAPDHSO14556 408 aaPredicted RBP14.33□□□□□ -0.11
XRCC1-201ENST00000262887 ACRV1P26436 265 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 CPT1AP50416 773 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 CLDN20P56880 219 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 RAB25P57735 213 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 SF1Q15637 639 aaKnown RBP14.33□□□□□ -0.11
XRCC1-201ENST00000262887 FRMPD2BQ6IN97 320 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 KLHL17Q6TDP4 642 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 ADGRG2Q8IZP9 1017 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 ATAD1Q8NBU5 361 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 VPS37AQ8NEZ2 397 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 AP2M1Q96CW1 435 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 QRFPRQ96P65 431 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 UQCC2Q9BRT2 126 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 HTATIP2Q9BUP3 242 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 ARHGAP39Q9C0H5 1083 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 LIN7BQ9HAP6 207 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 STOML2Q9UJZ1 356 aa14.33□□□□□ -0.11
XRCC1-201ENST00000262887 PRAMEF25A6NGN4 478 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 PCP4L1A6NKN8 68 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 NPIPB8E9PQR5 432 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 ORC5O43913 435 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 ACSL4O60488 711 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 SLC22A5O76082 557 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 GADD45GO95257 159 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 HLA-DQB1P01920 261 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 ARSBP15848 533 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 APEX1P27695 318 aaKnown RBP14.33□□□□□ -0.12
XRCC1-201ENST00000262887 MLLT11Q13015 90 aaPredicted RBP14.33□□□□□ -0.12
XRCC1-201ENST00000262887 C1DQ13901 141 aaKnown RBP14.33□□□□□ -0.12
XRCC1-201ENST00000262887 NCF4Q15080 339 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 ZXDCQ2QGD7 858 aaPredicted RBP14.33□□□□□ -0.12
XRCC1-201ENST00000262887 C22orf42Q6IC83 251 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 NCEH1Q6PIU2 408 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 ZNF782Q6ZMW2 699 aaPredicted RBP14.33□□□□□ -0.12
XRCC1-201ENST00000262887 NPAS3Q8IXF0 933 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 Q8N402 240 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 NANOGP1Q8N7R0 232 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 L3MBTL4Q8NA19 623 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 SKA2Q8WVK7 121 aaPredicted RBP14.33□□□□□ -0.12
XRCC1-201ENST00000262887 UPRTQ96BW1 309 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 TOE1Q96GM8 510 aaKnown RBP14.33□□□□□ -0.12
XRCC1-201ENST00000262887 UROC1Q96N76 676 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 GFM1Q96RP9 751 aaKnown RBP14.33□□□□□ -0.12
XRCC1-201ENST00000262887 ZIC5Q96T25 663 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 FZD3Q9NPG1 666 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 THSD1Q9NS62 852 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 ACER3Q9NUN7 267 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 DNAJC27Q9NZQ0 273 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 LYRM1O43325 122 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 ETFAP13804 333 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 EVI2BP34910 448 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 GJA5P36382 358 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 ANGPT1Q15389 498 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 ZNF628Q5EBL2 1059 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 CPTPQ5TA50 214 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 LAS2Q8IYD9 372 aa14.33□□□□□ -0.12
XRCC1-201ENST00000262887 C1orf52Q8N6N3 182 aaKnown RBP14.33□□□□□ -0.12
XRCC1-201ENST00000262887 CHD5Q8TDI0 1954 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 SMIM30A4D0T7 59 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 H3BNC9 293 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 TLR4O00206 839 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 BTN3A3O00478 584 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 SCAMP2O15127 329 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms