RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 AP2A2O94973 939 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 PSMA1P25786 263 aaKnown RBP16.68■□□□□ 0.26
TRAM1-201ENST00000262213 SPINT3P49223 89 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 SP140Q13342 867 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 PLEKHS1Q5SXH7 462 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 HOMEZQ8IX15 550 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 CAMKK1Q8N5S9 505 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 FAM46DQ8NEK8 389 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 OR52N2Q8NGI0 321 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 OR9Q1Q8NGQ5 310 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 NEIL2Q969S2 332 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 PPCDCQ96CD2 204 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 MAPKAP1Q9BPZ7 522 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 NPAP1Q9NZP6 1156 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 GRIP1Q9Y3R0 1128 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 PTX3P26022 381 aaPredicted RBP16.68■□□□□ 0.26
TRAM1-201ENST00000262213 MAPK8P45983 427 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 POM121L1PQ3SYA9 428 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 CST9Q5W186 159 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 C19orf48Q6RUI8 117 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 DNAJB7Q7Z6W7 309 aaPredicted RBP16.68■□□□□ 0.26
TRAM1-201ENST00000262213 IQCF1Q8N6M8 205 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 ASZ1Q8WWH4 475 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 REEP4Q9H6H4 257 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 C3orf14Q9HBI5 128 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 C1GALT1Q9NS00 363 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 CNOT2Q9NZN8 540 aaKnown RBP16.68■□□□□ 0.26
TRAM1-201ENST00000262213 ENPP4Q9Y6X5 453 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 GOLGA4Q13439 2230 aaKnown RBP16.68■□□□□ 0.26
TRAM1-201ENST00000262213 PLD2O14939 933 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 TSPAN6O43657 245 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 IFNW1P05000 195 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 SCG5P05408 212 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 CSNK1DP48730 415 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 TAS2R50P59544 299 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 SNRPD1P62314 119 aaKnown RBP16.67■□□□□ 0.26
TRAM1-201ENST00000262213 HOXC5Q00444 222 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 PRSS53Q2L4Q9 553 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 SLC8B1Q6J4K2 584 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 DPY19L3Q6ZPD9 716 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 COMMD6Q7Z4G1 85 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 IFNL1Q8IU54 200 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRAM1-201ENST00000262213 TCEANCQ8N8B7 351 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 PCSK9Q8NBP7 692 aaKnown RBP16.67■□□□□ 0.26
TRAM1-201ENST00000262213 CHST14Q8NCH0 376 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 SRRQ9GZT4 340 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 THSD1Q9NS62 852 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 SH2B3Q9UQQ2 575 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 TRAPPC4Q9Y296 219 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 CMAHPQ9Y471 501 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 PCDHGB2Q9Y5G2 931 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 SNX11Q9Y5W9 270 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 DNMT3AQ9Y6K1 912 aaPredicted RBP16.67■□□□□ 0.26
TRAM1-201ENST00000262213 PCM1Q15154 2024 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 IGLV3-16A0A075B6K0 115 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 SERTM1A2A2V5 107 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 CCDC182A6NF36 153 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 H0YIV9 168 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 SH3BP5O60239 455 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 OR10H3O60404 316 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 TMCC2O75069 709 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 UGT2B17O75795 530 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 DDOSTP39656 456 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 CRYBB2P43320 205 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 LIM2P55344 173 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 PSPHP78330 225 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 HNRNPA0Q13151 305 aaKnown RBP16.67■□□□□ 0.26
TRAM1-201ENST00000262213 MPEG1Q2M385 716 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 SPIN4Q56A73 249 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 TNFAIP8L2Q6P589 184 aaPredicted RBP16.67■□□□□ 0.26
TRAM1-201ENST00000262213 TRIM40Q6P9F5 258 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 Q6ZVL8 140 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 TMEM150AQ86TG1 271 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 C11orf74Q86VG3 221 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 DIRAS2Q96HU8 199 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 WRAP53Q9BUR4 548 aaKnown RBP16.67■□□□□ 0.26
TRAM1-201ENST00000262213 SORBS1Q9BX66 1292 aaKnown RBP16.67■□□□□ 0.26
TRAM1-201ENST00000262213 KLHL42Q9P2K6 505 aa16.67■□□□□ 0.26
TRAM1-201ENST00000262213 ZNF106Q9H2Y7 1883 aaKnown RBP16.67■□□□□ 0.26
TRAM1-201ENST00000262213 SH3D21A4FU49 640 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 FFAR1O14842 300 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 SLC16A5O15375 505 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 TPST2O60704 377 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 HBQ1P09105 142 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 TNNI3P19429 210 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 CSTF2P33240 577 aaKnown RBP eCLIP16.66■□□□□ 0.26
TRAM1-201ENST00000262213 ZNF763Q0D2J5 394 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 VEPH1Q14D04 833 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 C22orf42Q6IC83 251 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 TMIGD1Q6UXZ0 262 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 DEF8Q6ZN54 512 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 ARMCX6Q7L4S7 300 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 KLHL6Q8WZ60 621 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 NECTIN4Q96NY8 510 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 ZNF334Q9HCZ1 680 aaPredicted RBP16.66■□□□□ 0.26
TRAM1-201ENST00000262213 ASAH2Q9NR71 780 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 YARS2Q9Y2Z4 477 aaKnown RBP16.66■□□□□ 0.26
TRAM1-201ENST00000262213 ANAPC1Q9H1A4 1944 aa16.66■□□□□ 0.26
TRAM1-201ENST00000262213 EIF3FO00303 357 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms