RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ARL6Q9H0F7 186 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 TM9SF3Q9HD45 589 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 PCDHGB3Q9Y5G1 929 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 A0A1W2PP18 115 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 SRCP12931 536 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 AP3S2P59780 193 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 PTCHD3Q3KNS1 767 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 GPRC6AQ5T6X5 926 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 BEND4Q6ZU67 534 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 LCN9Q8WX39 176 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 SPATA9Q9BWV2 254 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 TFB2MQ9H5Q4 396 aaKnown RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 M0R2N6 131 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 AKR1A1P14550 325 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 ARSDP51689 593 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 TMEM107Q6UX40 140 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 PAMR1Q6UXH9 720 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 CIDECQ96AQ7 238 aaPredicted RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 NELL2Q99435 816 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 PCDHB1Q9Y5F3 818 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 IRS2Q9Y4H2 1338 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 UBFD1O14562 309 aaKnown RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 CAPN3P20807 821 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 Q6ZVU0 165 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 C7orf43Q8WVR3 580 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 HNRNPABQ99729 332 aaKnown RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 HAPLN2Q9GZV7 340 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 LTB4R2Q9NPC1 389 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 CLCA1A8K7I4 914 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 CLDN11O75508 207 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 SNHG28P0DPA3 235 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 DNASE1P24855 282 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 CA5AP35218 305 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 HADHBP55084 474 aaKnown RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 FRG2Q64ET8 278 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 FRG2BQ96QU4 278 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 MAB21L2Q9Y586 359 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 WNK2Q9Y3S1 2297 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 ERI3O43414 337 aaKnown RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 VSX2P58304 361 aaPredicted RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 HOXC5Q00444 222 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 PPP2R2DQ66LE6 453 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 MACROD1Q9BQ69 325 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 OR6C2Q9NZP2 312 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 GBX2P52951 348 aaPredicted RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 VAMP2P63027 116 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 MSANTD1Q6ZTZ1 278 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 KANSL1Q7Z3B3 1105 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 SPAG16Q8N0X2 631 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 DNAJC5GQ8N7S2 189 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 RASGEF1AQ8N9B8 481 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 DPF3Q92784 378 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 PTERQ96BW5 349 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 TLE6Q9H808 572 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 BCAS1O75363 584 aaPredicted RBP7.24□□□□□ -1.25
RIF1-201ENST00000243326 THEGLP0DJG4 465 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 SSX2Q16385 188 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 NADSYN1Q6IA69 706 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 FBXL22Q6P050 247 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 ZNF248Q8NDW4 579 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 RASSF5Q8WWW0 418 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 C17orf62Q9BQA9 187 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 BMP1P13497 986 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 ZNF181Q2M3W8 571 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 FTMTQ8N4E7 242 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 FCGR1BQ92637 280 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 LGALS12Q96DT0 336 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 SCN2AQ99250 2005 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 SLC5A2P31639 672 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 LASP1Q14847 261 aaKnown RBP7.24□□□□□ -1.25
RIF1-201ENST00000243326 CELF5Q8N6W0 485 aaKnown RBP7.24□□□□□ -1.25
RIF1-201ENST00000243326 OR8D1Q8WZ84 308 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 EFHD2Q96C19 240 aaPredicted RBP7.24□□□□□ -1.25
RIF1-201ENST00000243326 HAVCR1Q96D42 359 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 SLAMF8Q9P0V8 285 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 ZNF282Q9UDV7 671 aaPredicted RBP7.24□□□□□ -1.25
RIF1-201ENST00000243326 TGFBR1P36897 503 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 MRPS30Q9NP92 439 aaKnown RBP7.24□□□□□ -1.25
RIF1-201ENST00000243326 PCDHGB6Q9Y5F9 930 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 C2CD4AQ8NCU7 369 aaPredicted RBP7.24□□□□□ -1.25
RIF1-201ENST00000243326 SMIM3Q9BZL3 60 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 NLGN3Q9NZ94 848 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 B4DGG1 531 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 ZNF3P17036 446 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 CBX5P45973 191 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 RAB2AP61019 212 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 DENND1AQ8TEH3 1009 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 ZNF347Q96SE7 839 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 TTLL8A6PVC2 850 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 PENKP01210 267 aaPredicted RBP7.24□□□□□ -1.25
RIF1-201ENST00000243326 ITGA5P08648 1049 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 IL12BP29460 328 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 RPL3P39023 403 aaKnown RBP7.24□□□□□ -1.25
RIF1-201ENST00000243326 SLC6A9P48067 706 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 KCNJ8Q15842 424 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 ANKRD34AQ69YU3 496 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 TMCO2Q7Z6W1 182 aaPredicted RBP7.24□□□□□ -1.25
RIF1-201ENST00000243326 MFSD8Q8NHS3 518 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 TSPEARQ8WU66 669 aa7.24□□□□□ -1.25
RIF1-201ENST00000243326 GEMIN6Q8WXD5 167 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms