RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 NELL2Q99435 816 aa13.37□□□□□ -0.27
TARDBP-201ENST00000240185 NELFAQ9H3P2 528 aa13.37□□□□□ -0.27
TARDBP-201ENST00000240185 MAN2C1Q9NTJ4 1040 aa13.37□□□□□ -0.27
TARDBP-201ENST00000240185 ARMC1Q9NVT9 282 aa13.37□□□□□ -0.27
TARDBP-201ENST00000240185 WNT10BO00744 389 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 AMY2BP19961 511 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 PYCR1P32322 319 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 C1orf94Q6P1W5 598 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 TMEM205Q6UW68 189 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 RNF130Q86XS8 419 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 OR6N1Q8NGY5 312 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 GLYATL2Q8WU03 294 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 DDX1Q92499 740 aaKnown RBP13.36□□□□□ -0.27
TARDBP-201ENST00000240185 GPR22Q99680 433 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 MKRN2Q9H000 416 aaKnown RBP13.36□□□□□ -0.27
TARDBP-201ENST00000240185 AP1M2Q9Y6Q5 423 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 CNTN5O94779 1100 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 C6orf47O95873 294 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 PLGP00747 810 aaPredicted RBP13.36□□□□□ -0.27
TARDBP-201ENST00000240185 TMEM185AQ8NFB2 350 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 BEST4Q8NFU0 473 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 PCED1BQ96HM7 432 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 FAXDC2Q96IV6 333 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 PNO1Q9NRX1 252 aaKnown RBP13.36□□□□□ -0.27
TARDBP-201ENST00000240185 A8MVJ9 347 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 AIPO00170 330 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 SC5DO75845 299 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 APODP05090 189 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 CDK1P06493 297 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 ZBTB48P10074 688 aaPredicted RBP13.36□□□□□ -0.27
TARDBP-201ENST00000240185 GDF5P43026 501 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 TAS2R50P59544 299 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 RNASE10Q5GAN6 216 aaKnown RBP13.36□□□□□ -0.27
TARDBP-201ENST00000240185 PRAMEF19Q5SWL8 479 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 DCAF12L1Q5VU92 463 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 MLIPQ5VWP3 458 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 ZNF280BQ86YH2 543 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 TRIB2Q92519 343 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 UPF1Q92900 1129 aaKnown RBP eCLIP13.36□□□□□ -0.272e-11■■■□□ 15.1
TARDBP-201ENST00000240185 MCHR1Q99705 422 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 TEX10Q9NXF1 929 aaPredicted RBP13.36□□□□□ -0.27
TARDBP-201ENST00000240185 PREX1Q8TCU6 1659 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 MDFIC2A0A1B0GVS7 189 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 M0R2N6 131 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 ERCC1P07992 297 aaPredicted RBP13.36□□□□□ -0.27
TARDBP-201ENST00000240185 PTH2RP49190 550 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 CAPZA1P52907 286 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 KCNJ11Q14654 390 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.36□□□□□ -0.273e-6■■■■□ 22.6
TARDBP-201ENST00000240185 CYP27C1Q4G0S4 372 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 LRRC73Q5JTD7 316 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 SLC22A10Q63ZE4 541 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 CATSPERGQ6ZRH7 1159 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 TICAM1Q8IUC6 712 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 NRSN1Q8IZ57 195 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 OR56A1Q8NGH5 318 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 ELP5Q8TE02 316 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 SNAPC3Q92966 411 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 HMX1Q9NP08 348 aaPredicted RBP13.36□□□□□ -0.27
TARDBP-201ENST00000240185 KCNS2Q9ULS6 477 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 PTPRMP28827 1452 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 PTPRUQ92729 1446 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 MYO3AQ8NEV4 1616 aa13.36□□□□□ -0.27
TARDBP-201ENST00000240185 AGPAT2O15120 278 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 LYRM1O43325 122 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 RFPL3O75679 317 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 CD3GP09693 182 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 ACVR1BP36896 505 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 TBC1D25Q3MII6 688 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 OR8J1Q8NGP2 316 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 ZNF514Q96K75 400 aaPredicted RBP13.35□□□□□ -0.27
TARDBP-201ENST00000240185 RBP7Q96R05 134 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 CCDC106Q9BWC9 280 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 HDHD5Q9BXW7 423 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 RBCK1Q9BYM8 510 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 Q9N2J8 555 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 KCNJ16Q9NPI9 418 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 CPQQ9Y646 472 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 GOSR2O14653 212 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 AHSA1O95433 338 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 EPHX2P34913 555 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 ATP4BP51164 291 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 GABARAPL2P60520 117 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 PMS2P3Q13401 168 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 GALEQ14376 348 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 SMOXQ9NWM0 555 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 CLEC4EQ9ULY5 219 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 TEX264Q9Y6I9 313 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 CPS1P31327 1500 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 TFP02787 698 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 NIPA2Q8N8Q9 360 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 GDPD1Q8N9F7 314 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 WDSUB1Q8N9V3 476 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 URM1Q9BTM9 101 aaKnown RBP13.35□□□□□ -0.27
TARDBP-201ENST00000240185 APOBEC3GQ9HC16 384 aaKnown RBP13.35□□□□□ -0.27
TARDBP-201ENST00000240185 PCTPQ9UKL6 214 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 HEBP2Q9Y5Z4 205 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 KLRG2A4D1S0 409 aaPredicted RBP13.35□□□□□ -0.27
TARDBP-201ENST00000240185 RHPN2P1A8MT19 583 aa13.35□□□□□ -0.27
TARDBP-201ENST00000240185 A8MUA0 341 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms