RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 PRSS55Q6UWB4 352 aaPredicted RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 FRMD7Q6ZUT3 714 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 ZDHHC21Q8IVQ6 265 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 ZNF283Q8N7M2 679 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 PCDH19Q8TAB3 1148 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 FNDC8Q8TC99 324 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 CCNL2Q96S94 520 aaPredicted RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 ATG10Q9H0Y0 220 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 RNPEPL1Q9HAU8 725 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 ANKRD30BLA7E2S9 258 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 EDF1O60869 148 aaKnown RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 UBOX5O94941 541 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 FABP1P07148 127 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 LBX1P52954 281 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 BNIP3Q12983 259 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 SEMA5AQ13591 1074 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 TPRG1LQ5T0D9 272 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 LINGO4Q6UY18 593 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 OR14L1PQ8NHC6 308 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 CYB5D2Q8WUJ1 264 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 NMD3Q96D46 503 aaKnown RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 NANOGQ9H9S0 305 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 EMC9Q9Y3B6 208 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 ANKRD36CQ5JPF3 1778 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 EPHB6O15197 1021 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 HCRTR2O43614 444 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 B4GALT2O60909 372 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 FGF4P08620 206 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 ZNF16P17020 682 aaPredicted RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 PRPS1P60891 318 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 CNPY1Q3B7I2 92 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 TEX29Q8N6K0 151 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 RCBTB1Q8NDN9 531 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 GTPBP3Q969Y2 492 aaKnown RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 PGAM5Q96HS1 289 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 MYRFLQ96LU7 910 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 C7orf26Q96N11 449 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 ZNF578Q96N58 590 aaPredicted RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 CCDC32Q9BV29 185 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 YTHDF1Q9BYJ9 559 aaKnown RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 TEX13DA0A0J9YY54 714 aaPredicted RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 CENPBD1B2RD01 187 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 C2P06681 752 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 BPGMP07738 259 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 RHOP08100 348 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 PNMTP11086 282 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 EXOC3L2Q2M3D2 409 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 FUKQ8N0W3 1084 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 PLD6Q8N2A8 252 aaKnown RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 SHKBP1Q8TBC3 707 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 NKD2Q969F2 451 aaPredicted RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 SPIN2AQ99865 258 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 SPIN2BQ9BPZ2 258 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 DNAJB9Q9UBS3 223 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 MGAT4BQ9UQ53 548 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 CPSF4LA6NMK7 179 aaKnown RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 PAPSS1O43252 624 aaPredicted RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 ARHGEF15O94989 841 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 VNN2O95498 520 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 ADRB2P07550 413 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 XRCC1P18887 633 aaPredicted RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 RPL5P46777 297 aaKnown RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 DSC1Q08554 894 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 CCNJQ5T5M9 372 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 ZDHHC1Q8WTX9 485 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 IGSF21Q96ID5 467 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 FAM118AQ9NWS6 357 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 UBR2Q8IWV8 1755 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 E7ENX8 843 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 S1PR4O95977 384 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 TUBA1BP68363 451 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 TUBA4AP68366 448 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 TAP2Q03519 686 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 CNN3Q15417 329 aaKnown RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 VMACQ2NL98 169 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 MS4A13Q5J8X5 152 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 OR52E8Q6IFG1 317 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 NIPAL3Q6P499 406 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 TLDC1Q6P9B6 456 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 USP53Q70EK8 1073 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 TUBA1AQ71U36 451 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 MISPQ8IVT2 679 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 RDH10Q8IZV5 341 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 RNF128Q8TEB7 428 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 LRRN4Q8WUT4 740 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 OR5P2Q8WZ92 322 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 TSGA13Q96PP4 275 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 HSFX1Q9UBD0 423 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 PCDHGC4Q9Y5F7 938 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 SFTPCP11686 197 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 PTGS2P35354 604 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 GPR176Q14439 515 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 TIGD2Q4W5G0 525 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 REP15Q6BDI9 236 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 ARHGAP11AQ6P4F7 1023 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 ZSWIM9Q86XI8 627 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 OR4N5Q8IXE1 308 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 PSD4Q8NDX1 1056 aa7.16□□□□□ -1.26
MED28-201ENST00000237380 RPL10LQ96L21 214 aaKnown RBP7.16□□□□□ -1.26
MED28-201ENST00000237380 SERINC2Q96SA4 455 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms