RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ABI3BPQ7Z7G0 1075 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 DDX53Q86TM3 631 aaKnown RBP16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 ZBED6CLQ96FA7 236 aaPredicted RBP16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 NLKQ9UBE8 527 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 RAI2Q9Y5P3 530 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 NUP214P35658 2090 aaPredicted RBP16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 PLXNA3P51805 1871 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 HCN1O60741 890 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 AP2A2O94973 939 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 HLA-DQB1P01920 261 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 HBQ1P09105 142 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 SRCP12931 536 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 COX7A2P14406 83 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 CR2P20023 1033 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 DGKAP23743 735 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 ARHGEF7Q14155 803 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 WSCD2Q2TBF2 565 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 MZT2BQ6NZ67 158 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 MIB1Q86YT6 1006 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 HYLS1Q96M11 299 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 QRFPRQ96P65 431 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 TMEM175Q9BSA9 504 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 TXNL4BQ9NX01 149 aaKnown RBP16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 FAM120CQ9NX05 1096 aaKnown RBP16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 SCML2Q9UQR0 700 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 AP1M2Q9Y6Q5 423 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 KCNE1BA0A087WTH5 132 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 PRAMEF25A6NGN4 478 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 UPK3BL1B0FP48 263 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 UPK3BL2E5RIL1 263 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 PCDH17O14917 1159 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 TSPAN9O75954 239 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 APEX1P27695 318 aaKnown RBP16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 EVI2BP34910 448 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 MRPL28Q13084 256 aaKnown RBP16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 IFI44LQ53G44 452 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 TRIQKQ629K1 86 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 SYT12Q8IV01 421 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 PHC2Q8IXK0 858 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 LAS2Q8IYD9 372 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 C19orf18Q8NEA5 215 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 BOCQ9BWV1 1114 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 POLR2J2Q9GZM3 115 aaKnown RBP16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 GALNT9Q9HCQ5 603 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 FZD3Q9NPG1 666 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 COQ3Q9NZJ6 369 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 ANKRD66B4E2M5 251 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 TRIM77I1YAP6 450 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 J3KTA2 159 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 ARSBP15848 533 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 GATMP50440 423 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 DGKKQ5KSL6 1271 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 LIPKQ5VXJ0 399 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 CNKSR3Q6P9H4 555 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 ZNF782Q6ZMW2 699 aaPredicted RBP16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 OR9Q1Q8NGQ5 310 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 IL4I1Q96RQ9 567 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 COPS8Q99627 209 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 MND1Q9BWT6 205 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 CRISPLD1Q9H336 500 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 ELF5Q9UKW6 265 aaPredicted RBP16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 PRSS21Q9Y6M0 314 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 FAM240BA0A1B0GVZ2 78 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 SLC25A14O95258 325 aaPredicted RBP16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 SLC2A2P11168 524 aaPredicted RBP16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 ACPPP15309 386 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 TNNI3P19429 210 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 CRISP1P54107 249 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 ZNF628Q5EBL2 1059 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 CSGALNACT1Q8TDX6 532 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 KLHL6Q8WZ60 621 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 AP2M1Q96CW1 435 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 SAMD11Q96NU1 681 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 ZSCAN5AQ9BUG6 496 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 C11orf49Q9H6J7 331 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 STOML2Q9UJZ1 356 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 TMCC3Q9ULS5 477 aa16.92■□□□□ 0.3
CDKN1B-201ENST00000228872 SLC43A1O75387 559 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 CLTBP09497 229 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 PRKAR1AP10644 381 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 GPR15P49685 360 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 PER3P56645 1201 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 MLLT11Q13015 90 aaPredicted RBP16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 SUZ12Q15022 739 aaKnown RBP16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 RGNQ15493 299 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 MEDAGQ5VYS4 303 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 KLHL17Q6TDP4 642 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 DEFB128Q7Z7B8 93 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 CFAP52Q8N1V2 620 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 C1orf52Q8N6N3 182 aaKnown RBP16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 C11orf65Q8NCR3 313 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 FAM46DQ8NEK8 389 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 TOR1AIP2Q8NFQ8 470 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 SH3KBP1Q96B97 665 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 GPR137Q96N19 417 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 GFM1Q96RP9 751 aaKnown RBP16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 AIFM2Q9BRQ8 373 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 ANKRA2Q9H9E1 313 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 LYRM1O43325 122 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 LAMP1P11279 417 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms