RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 POGLUT1Q8NBL1 392 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 MCHR1Q99705 422 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 SMOQ99835 787 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 CREG1O75629 220 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 ARL6IP5O75915 188 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 CSTAP01040 98 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 KCNE1P15382 129 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 ZNF763Q0D2J5 394 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 PPP1R8Q12972 351 aaKnown RBP12.76□□□□□ -0.37
COL1A1-201ENST00000225964 SERINC3Q13530 473 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 NCEH1Q6PIU2 408 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 PRR11Q96HE9 360 aaPredicted RBP12.76□□□□□ -0.37
COL1A1-201ENST00000225964 LRCH3Q96II8 777 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 TSGA13Q96PP4 275 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 IL23AQ9NPF7 189 aa12.76□□□□□ -0.37
COL1A1-201ENST00000225964 OR2B3O76000 313 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 P04436 131 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 CYBRD1Q53TN4 286 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 SH3D19Q5HYK7 790 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 SWT1Q5T5J6 900 aaKnown RBP12.75□□□□□ -0.37
COL1A1-201ENST00000225964 TMEM107Q6UX40 140 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 CILP2Q8IUL8 1156 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 TXNRD2Q9NNW7 524 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 DMAC2Q9NW81 257 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 PLIN4Q96Q06 1357 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 ASGR2P07307 311 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 OR1E2P47887 323 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 AGTR2P50052 363 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 TRAM2Q15035 370 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 FAM76BQ5HYJ3 339 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 USP53Q70EK8 1073 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 TXNDC5Q8NBS9 432 aaKnown RBP12.75□□□□□ -0.37
COL1A1-201ENST00000225964 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL1A1-201ENST00000225964 DOK4Q8TEW6 326 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 PGAM5Q96HS1 289 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 TPSD1Q9BZJ3 242 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 REEP4Q9H6H4 257 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 TPT1P8Q9HAU6 139 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 MRM3Q9HC36 420 aaKnown RBP12.75□□□□□ -0.37
COL1A1-201ENST00000225964 A0A1W2PQU0 124 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 ACOT7O00154 380 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 AURKAO14965 403 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 SCGB2A1O75556 95 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 ADH7P40394 386 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 ABRAXAS2Q15018 415 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 HMGN2P46Q86SG4 172 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 OR4K1Q8NGD4 311 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 SCGB1C1Q8TD33 95 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 NR4A3Q92570 626 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 ZC3H10Q96K80 434 aaKnown RBP12.75□□□□□ -0.37
COL1A1-201ENST00000225964 NTPCRQ9BSD7 190 aaKnown RBP12.75□□□□□ -0.37
COL1A1-201ENST00000225964 MT-ND5P03915 603 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 GJA8P48165 433 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 FXYD6P3P58550 94 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 HERC3Q15034 1050 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 PAFAH1B3Q15102 231 aaKnown RBP12.75□□□□□ -0.37
COL1A1-201ENST00000225964 COQ8AQ8NI60 647 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 ASB12Q8WXK4 309 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 NECAB3Q96P71 396 aaPredicted RBP12.75□□□□□ -0.37
COL1A1-201ENST00000225964 ATG5Q9H1Y0 275 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 MS4A12Q9NXJ0 267 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 PROM1O43490 865 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 HADHBP55084 474 aaKnown RBP12.75□□□□□ -0.37
COL1A1-201ENST00000225964 E2F1Q01094 437 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 CD83Q01151 205 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 ZNF630Q2M218 657 aaPredicted RBP12.75□□□□□ -0.37
COL1A1-201ENST00000225964 SPRYD4Q8WW59 207 aaPredicted RBP12.75□□□□□ -0.37
COL1A1-201ENST00000225964 OR52B2Q96RD2 323 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 CCNL2Q96S94 520 aaPredicted RBP12.75□□□□□ -0.37
COL1A1-201ENST00000225964 EBF2Q9HAK2 575 aa12.75□□□□□ -0.37
COL1A1-201ENST00000225964 FZD9O00144 591 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 NFKBIEO00221 500 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 TSPAN6O43657 245 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 SOX2P48431 317 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 TAS2R43P59537 309 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 UBE2NP61088 152 aaKnown RBP12.74□□□□□ -0.37
COL1A1-201ENST00000225964 KCNJ11Q14654 390 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 LACTB2Q53H82 288 aaPredicted RBP12.74□□□□□ -0.37
COL1A1-201ENST00000225964 CRTC1Q6UUV9 634 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 ZC3HC1Q86WB0 502 aaKnown RBP12.74□□□□□ -0.37
COL1A1-201ENST00000225964 GALNT12Q8IXK2 581 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 SLC35F5Q8WV83 523 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 THAP4Q8WY91 577 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 TMEM74Q96NL1 305 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 PIGRP01833 764 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 ANXA3P12429 323 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 S1PR1P21453 382 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 ACRV1P26436 265 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 GGT2P36268 569 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 KCNC1P48547 511 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 SLC39A4Q6P5W5 647 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 C14orf80Q86SX3 495 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 TRAM1L1Q8N609 369 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 ZDHHC1Q8WTX9 485 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 RAB7BQ96AH8 199 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 FUZQ9BT04 418 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 MED1Q15648 1581 aaPredicted RBP12.74□□□□□ -0.37
COL1A1-201ENST00000225964 SH3PXD2BA1X283 911 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 AQP12BA6NM10 295 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 LIN52Q52LA3 116 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms