RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 MINDY4Q4G0A6 757 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 ATP1A1-AS1Q5TC04 95 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 MFSD4BQ5TF39 518 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 FAAH2Q6GMR7 532 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 CYP20A1Q6UW02 462 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 RNF165Q6ZSG1 346 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 MAVSQ7Z434 540 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 CRLF3Q8IUI8 442 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 WDR75Q8IWA0 830 aaKnown RBP9.5□□□□□ -0.89
CD9-201ENST00000009180 MMP21Q8N119 569 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 SRFBP1Q8NEF9 429 aaKnown RBP9.5□□□□□ -0.89
CD9-201ENST00000009180 CDC26Q8NHZ8 85 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 CHTF18Q8WVB6 975 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 UCN3Q969E3 161 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 KIAA1143Q96AT1 154 aaPredicted RBP9.5□□□□□ -0.89
CD9-201ENST00000009180 MIEF2Q96C03 454 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 THOC1Q96FV9 657 aaKnown RBP9.5□□□□□ -0.89
CD9-201ENST00000009180 SLC45A3Q96JT2 553 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 C7orf26Q96N11 449 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 ROGDIQ9GZN7 287 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 DDX31Q9H8H2 851 aaKnown RBP9.5□□□□□ -0.89
CD9-201ENST00000009180 LRTM1Q9HBL6 345 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 MKKSQ9NPJ1 570 aaPredicted RBP9.5□□□□□ -0.89
CD9-201ENST00000009180 TEX10Q9NXF1 929 aaPredicted RBP9.5□□□□□ -0.89
CD9-201ENST00000009180 KCMF1Q9P0J7 381 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 ZNF282Q9UDV7 671 aaPredicted RBP9.5□□□□□ -0.89
CD9-201ENST00000009180 FBXW2Q9UKT8 454 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 DAPP1Q9UN19 280 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 DLGAP4Q9Y2H0 992 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 ATG4BQ9Y4P1 393 aa9.5□□□□□ -0.89
CD9-201ENST00000009180 POLR3HQ9Y535 204 aaPredicted RBP9.5□□□□□ -0.89
CD9-201ENST00000009180 ZZEF1O43149 2961 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 IGLV3-12A0A075B6K2 115 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 A0A088AWK7 358 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 GOLGA8QA0A0J9YX86 632 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 MYOCOSA0A1B0GUC4 107 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 GOLGA8OA6NCC3 632 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 GOLGA8NF8WBI6 632 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 SDHDO14521 159 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 LSM1O15116 133 aaKnown RBP9.49□□□□□ -0.89
CD9-201ENST00000009180 SEC22BO75396 215 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 RSL1D1O76021 490 aaKnown RBP9.49□□□□□ -0.89
CD9-201ENST00000009180 SNUPNO95149 360 aaKnown RBP9.49□□□□□ -0.89
CD9-201ENST00000009180 ALBP02768 609 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 FHP07954 510 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 RAB40ALP0C0E4 278 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 FAM58BPP0C7Q3 252 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 PRKAR1AP10644 381 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 ZNF10P21506 573 aaPredicted RBP9.49□□□□□ -0.89
CD9-201ENST00000009180 PTPN4P29074 926 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 TIA1P31483 386 aaKnown RBP eCLIP9.49□□□□□ -0.89
CD9-201ENST00000009180 FOLR3P41439 243 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 MAPK12P53778 367 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 RAB38P57729 211 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 RPS15P62841 145 aaKnown RBP9.49□□□□□ -0.89
CD9-201ENST00000009180 TNFRSF17Q02223 184 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 OCA2Q04671 838 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 KLC1Q07866 573 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 ACSM2AQ08AH3 577 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 SF3A3Q12874 501 aaKnown RBP eCLIP9.49□□□□□ -0.89
CD9-201ENST00000009180 SLC9B1Q4ZJI4 515 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 SPIN4Q56A73 249 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 CCNYL2Q5T2Q4 361 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 ACSM2BQ68CK6 577 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 C18orf63Q68DL7 685 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 MRM1Q6IN84 353 aaKnown RBP9.49□□□□□ -0.89
CD9-201ENST00000009180 NIPAL1Q6NVV3 410 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 DNAJC14Q6Y2X3 702 aaPredicted RBP9.49□□□□□ -0.89
CD9-201ENST00000009180 RGS9BPQ6ZS82 235 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 CLNKQ7Z7G1 428 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 ZCCHC7Q8N3Z6 543 aaKnown RBP9.49□□□□□ -0.89
CD9-201ENST00000009180 AMER2Q8N7J2 671 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 STARD8Q92502 1023 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 TBC1D20Q96BZ9 403 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 TUBGCP3Q96CW5 907 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 CRB3Q9BUF7 120 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 C1orf50Q9BV19 199 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 NPLQ9BXD5 320 aaPredicted RBP9.49□□□□□ -0.89
CD9-201ENST00000009180 DPH1Q9BZG8 443 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 SLC26A1Q9H2B4 701 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 WDR55Q9H6Y2 383 aaPredicted RBP9.49□□□□□ -0.89
CD9-201ENST00000009180 WDR54Q9H977 334 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 NMRK1Q9NWW6 199 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 C1orf109Q9NX04 203 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 LYARQ9NX58 379 aaKnown RBP9.49□□□□□ -0.89
CD9-201ENST00000009180 AHSPQ9NZD4 102 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 TCFL5Q9UL49 500 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 MKL2Q9ULH7 1088 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 FARSAQ9Y285 508 aaKnown RBP9.49□□□□□ -0.89
CD9-201ENST00000009180 ASB4Q9Y574 426 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 USH1CQ9Y6N9 552 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 SCN3AQ9NY46 2000 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 PCSK5Q92824 1860 aa9.49□□□□□ -0.89
CD9-201ENST00000009180 GNG14A0A1W2PPG7 69 aa9.48□□□□□ -0.89
CD9-201ENST00000009180 A0A1W2PR48 441 aa9.48□□□□□ -0.89
CD9-201ENST00000009180 TMEM8BA6NDV4 472 aa9.48□□□□□ -0.89
CD9-201ENST00000009180 GLOD5A6NK44 160 aa9.48□□□□□ -0.89
CD9-201ENST00000009180 WASHC1A8K0Z3 465 aa9.48□□□□□ -0.89
CD9-201ENST00000009180 TGFBR3LH3BV60 316 aa9.48□□□□□ -0.89
CD9-201ENST00000009180 PSMD12O00232 456 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms