RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 ExogQ8C163 368 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tbl3Q8C4J7 801 aaKnown RBP9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Mrps18cQ8R2L5 143 aaKnown RBP9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Sorcs3Q8VI51 1219 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Stpg4Q9DAG5 247 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gpc1Q9QZF2 557 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Il18bpQ9Z0M9 193 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Padi4Q9Z183 666 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gm28043E0CXC2 719 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Crisp4E9PVG4 293 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 DdcO88533 480 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Sod1P08228 154 aaKnown RBP9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 CryabP23927 175 aaKnown RBP9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Klrb1aP27811 227 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 SnrpnP63163 240 aaKnown RBP9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tmem64Q3U145 381 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Cpxcr1Q3V0P1 322 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Fam71bQ5STT6 665 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olig3Q6PFG8 273 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr527Q7TRT9 305 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Csnk1g2Q8BVP5 415 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Rcor1Q8CFE3 480 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Lgi4Q8K1S1 537 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Nckap1lQ8K1X4 1134 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr570Q8VH12 312 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Pcdhga12Q91XY7 932 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 BollQ924M5 281 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tma16Q9CR02 221 aaKnown RBP9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 RgccQ9DBX1 137 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Mmp1aQ9EPL5 464 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Stard5Q9EPQ7 213 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tnfrsf22Q9ER62 198 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Usp18Q9WTV6 368 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Cpne6Q9Z140 557 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr1200A2ATJ4 336 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Aif1O70200 147 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Klk1b9P15949 261 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tie1Q06806 1134 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Usp39Q3TIX9 564 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tex10Q3URQ0 928 aaKnown RBP9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gstt2Q61133 244 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr699Q7TRN3 316 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Bnc2Q8BMQ3 1127 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Timmdc1Q8BUY5 285 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Vmn1r84Q8R284 318 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Zfp709Q8VC29 727 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ffar2Q8VCK6 330 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Fam110cQ8VE94 421 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ing3Q8VEK6 421 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Vmn1r69Q8VIC1 319 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Acy1Q99JW2 408 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tnfsf13Q9D777 241 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Emc7Q9EP72 241 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ca7Q9ERQ8 264 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tbk1Q9WUN2 729 aa9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Keap1Q9Z2X8 624 aaKnown RBP9.45□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tet2Q4JK59 1912 aaKnown RBP9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Phf11cB4XVP9 339 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Vmn1r31L7N2F1 303 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Chil3O35744 398 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ppm1bP36993 390 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tbc1d10aP58802 500 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 EvlP70429 414 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 OgnQ62000 298 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Doxl2Q6IMK7 723 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 RfflQ6ZQM0 377 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Rbbp8Q80YR6 893 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Abhd16bQ80YU0 474 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 PimregQ8BFY7 231 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 9130023H24RikQ8BG98 337 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tspan12Q8BKT6 305 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 BC024139Q8BVJ3 772 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Cldn17Q8BXA6 224 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Sertm1Q8CD78 107 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tp53bp2Q8CG79 1128 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Cnot6Q8K3P5 557 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gsg1Q8R1W2 324 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Pla2g15Q8VEB4 412 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr551Q8VG23 315 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr1233Q8VGN0 305 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gkn2Q9CQS6 184 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Prps2Q9CS42 318 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Sugt1Q9CX34 336 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Eral1Q9CZU4 437 aaKnown RBP9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Q9D4G1 230 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Prl8a1Q9DAV8 240 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 MioxQ9QXN5 285 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Thbs4Q9Z1T2 963 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 SvilQ8K4L3 2170 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Slc9a5B2RXE2 898 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Amd2D3Z6H8 334 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Rdh5O55240 318 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Btnl2O70355 454 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Znf703P0CL69 594 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Amd1P0DMN7 334 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ptpn2Q06180 406 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Znf516Q7TSH3 1157 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Chst14Q80V53 376 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Cdk5rap1Q8BTW8 588 aa9.44□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Bbs4Q8C1Z7 520 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms