RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Nxph1Q61200 271 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pex11gQ6P6M5 241 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Osgepl1Q6PEB4 414 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 HjurpQ6PG16 667 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Csgalnact1Q8BJQ9 530 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cyp20a1Q8BKE6 462 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ppp1r1cQ8BKK4 108 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Mon1bQ8BMQ8 553 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cops7bQ8BV13 264 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zfpm2Q8CCH7 1151 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Nckap1lQ8K1X4 1134 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ahi1Q8K3E5 1047 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pcdhb3Q91XZ7 784 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cyp4f3Q99N16 524 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Kif19Q99PT9 997 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Prl7c1Q9CRB5 251 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Atp13a2Q9CTG6 1169 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 OoepQ9CWE6 164 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 1700080O16RikQ9D9G4 284 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ift43Q9DA69 206 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Yae1d1Q9DAY6 216 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rcan2Q9JHG2 197 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 DptQ9QZZ6 201 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Piezo1E2JF22 2547 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Lama1P19137 3084 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Syndig1A2ANU3 258 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rnf165E9QAU8 347 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm20441G3UYJ7 252 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zfp275G3X904 499 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr738L7N1X7 311 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 GcatO88986 416 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 InvsO89019 1062 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 P18533 117 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Sem1P60897 70 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Crnkl1P63154 690 aaKnown RBP8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 SnrpnP63163 240 aaKnown RBP8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Slc37a3Q3TIT8 494 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tmem64Q3U145 381 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 TepsinQ3U3N6 573 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Smu1Q3UKJ7 513 aaKnown RBP8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Sel1l2Q3V172 688 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Atp4aQ64436 1033 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rassf6Q80UQ2 353 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Fbxl4Q8BH70 621 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ikzf4Q8C208 586 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cdkl1Q8CEQ0 352 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Erich5Q8K0S2 362 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Colec12Q8K4Q8 742 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cdt1Q8R4E9 557 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Clec2fQ8VI21 196 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Edem1Q925U4 652 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 HnrnpabQ99020 285 aaKnown RBP8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Glipr1Q9CWG1 255 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Sh2d4aQ9D7V1 421 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 NvlQ9DBY8 855 aaKnown RBP8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tox2A2A472 547 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ttc39aA2ACP1 578 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr741L7N1Y5 311 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rdh5O55240 318 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Matn4O89029 624 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Mtnd2P03893 345 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pmp22P16646 161 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 BrafP28028 804 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rph3aP47708 681 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ube2iP63280 158 aaKnown RBP8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Dlx5P70396 289 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Nkx6-3Q3UHX8 262 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Flot2Q60634 428 aaKnown RBP8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 MertkQ60805 994 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Map3k3Q61084 626 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 N4bp1Q6A037 893 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 AstlQ6HA09 435 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Slco4c1Q8BGD4 722 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Fam92aQ8BP22 355 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rgs8Q8BXT1 180 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ptov1Q91VU8 416 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Fam118aQ91YN1 357 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Itfg1Q99KW9 610 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Arr3Q9EQP6 381 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Dnase2bQ9QY48 354 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ror2Q9Z138 944 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 FrylF8VQ05 3007 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm43518A0A0G2JGB6 165 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm8922F6XVS9 199 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm11168J3QN50 228 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tbxa2rP30987 341 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Mmp7Q10738 264 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 C2cd4cC2CD4Q5HZI2 419 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Vsx2Q61412 361 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zp1Q62005 623 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 CebpeQ6PZD9 281 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tmc6Q7TN60 810 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gramd1bQ80TI0 738 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Teddm1aQ810U2 305 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Abhd4Q8VD66 342 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr551Q8VG23 315 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Catsper1Q91ZR5 686 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Oosp1Q925U0 202 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 EtfaQ99LC5 333 aaKnown RBP8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Bcas2Q9D287 225 aa8.29□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms