RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 CpmQ80V42 443 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr811Q8VFI1 319 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Nipal2Q91WC7 383 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tm4sf4Q91XD3 202 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pcdhga6Q91XY2 932 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Arhgap8Q9CXP4 425 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 MtpapQ9D0D3 585 aaKnown RBP9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 IqchQ9D2K4 1071 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Prss23Q9D6X6 382 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 ItpaQ9D892 198 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 NsdhlQ9R1J0 362 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Myh9Q8VDD5 1960 aaKnown RBP9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Fmo6J3QMN6 532 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr1121L7MTT1 314 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Vmn2r29L7N2D4 852 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Clk4O35493 481 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Neu1O35657 409 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 P01631 113 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ntf3P20181 258 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 HexaP29416 528 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Hsd11b2P51661 386 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Acss3Q14DH7 682 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ffar3Q3UFD7 319 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gabbr2Q80T41 940 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Hyal5Q812F3 526 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Fut11Q8BHC9 489 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ces2eQ8BK48 559 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Klhl24Q8BRG6 600 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pggt1bQ8BUY9 377 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cstf2tQ8C7E9 632 aaKnown RBP9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Zfyve21Q8VCM3 234 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr1346Q8VGH6 313 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Vmn1r69Q8VIC1 319 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Twist2Q9D030 160 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Upf1Q9EPU0 1124 aaKnown RBP9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 PrepQ9QUR6 710 aa9.93□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pgm2A2CEK3 580 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr549E9Q542 316 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Usp2O88623 613 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Yap1P46938 488 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Yy2Q3TTC2 378 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Arcn1Q5XJY5 511 aaKnown RBP9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Elavl3Q60900 367 aaKnown RBP9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mep1bQ61847 704 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 OmpQ64288 163 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Dnajc27Q8CFP6 273 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Sirt5Q8K2C6 310 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Vmn1r84Q8R284 318 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Snx11Q91WL6 271 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tmem35aQ9D328 167 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 ClcnkbQ9WUB6 687 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Xlr4aA2BI40 215 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Inpp5aE9QAS7 422 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm10479K7N6H4 105 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Rgs7O54829 469 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Sp1O89090 784 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Psmd7P26516 321 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gal3st3P61315 431 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 ErfP70459 551 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mmp11Q02853 492 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Alg11Q3TZM9 492 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ppp3r2Q63811 179 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tas2r110Q7M712 333 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Znf423Q80TS5 1292 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Kyat1Q8BTY1 424 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gramd1cQ8CI52 457 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 NrmQ8VC65 262 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Apbb2Q9DBR4 760 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Timp4Q9JHB3 224 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Robo3Q9Z2I4 1366 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Myh10Q61879 1976 aaKnown RBP9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm42688A0A0R3P9D1 673 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ggta1P23336 394 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 TtkP35761 856 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 SmoP56726 793 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Opa3Q505D7 179 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Il18r1Q61098 537 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr594Q7TRR4 311 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Zmpste24Q80W54 475 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ccdc142Q8CAI1 738 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Q8CF31 99 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Coq9Q8K1Z0 313 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ppp1r8Q8R3G1 351 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Elmod3Q91YP6 381 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Imp3Q921Y2 184 aaKnown RBP9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Slc26a5Q99NH7 744 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 NtpcrQ9CQA9 190 aaKnown RBP9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mgme1Q9CXC3 338 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tmigd1Q9D7L8 261 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Slco1c1Q9ERB5 715 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Praf2Q9JIG8 178 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mbd4Q9Z2D7 554 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Adh6bA0A1D5RMB0 384 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Smurf2A2A5Z6 748 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cd300ld2A2A7W0 305 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gsg1lD3Z7H4 322 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Zfp945E9PYM8 794 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr319L7MTY4 306 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Dgcr6O35347 198 aa9.92□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ctla2aP12399 137 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms