RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Sgk2Q9QZS5 367 aa15.58■□□□□ 0.09
Trim28-201ENSMUST00000005705 SrrQ9QZX7 339 aa15.58■□□□□ 0.09
Trim28-201ENSMUST00000005705 Vmn1r10W4VSP8 311 aa15.58■□□□□ 0.09
Trim28-201ENSMUST00000005705 Syndig1A2ANU3 258 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Tmem215A7E1Z1 235 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Btbd3P58545 530 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Apoa1Q00623 264 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Tigd2Q0VBL1 525 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Amer3Q6NS69 780 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Vmn1r234Q8R298 329 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Aim2Q91VJ1 354 aaKnown RBP15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 5530401A14RikQ9D3H9 131 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Atp5oQ9DB20 213 aaKnown RBP15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ropn1lQ9EQ00 218 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Loxl3Q9Z175 754 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Plxna3P70208 1872 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Olfr1303A2AVW1 312 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Tnfrsf25B1AWN9 411 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Stk16O88697 305 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Entpd1P55772 510 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ankrd28Q505D1 1053 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Commd7Q8BG94 200 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Znf750Q8BH05 703 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Rgs7bpQ8BQP9 257 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Cpne5Q8JZW4 593 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Elf5Q8VDK3 253 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 PxnQ8VI36 591 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 RragcQ99K70 398 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Mrpl9Q99N94 265 aaKnown RBP15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Trappc5Q9CQA1 188 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Tnfrsf12aQ9CR75 129 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Cep97Q9CZ62 856 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Khdrbs3Q9R226 346 aaKnown RBP15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 Cst9Q9Z0H6 137 aa15.58■□□□□ 0.08
Trim28-201ENSMUST00000005705 BC034090A0A087WP46 1202 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 TprnA2AI08 749 aaKnown RBP15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Izumo4D3Z690 227 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Man2a1P27046 1150 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 AbatP61922 500 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Rps13P62301 151 aaKnown RBP15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Cd244Q07763 397 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gsk3aQ2NL51 490 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Secisbp2Q3U1C4 858 aaKnown RBP15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Krt76Q3UV17 594 aaKnown RBP15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Coq8bQ566J8 533 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 MarcoQ60754 518 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm5416Q6IE28 97 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Dennd5aQ6PAL8 1287 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 F12Q80YC5 597 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Vmn1r201Q8R262 300 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Pla2g15Q8VEB4 412 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Akr1c21Q91WR5 323 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 NtpcrQ9CQA9 190 aaKnown RBP15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ing1Q9QXV3 279 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Myo15aQ9QZZ4 3511 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Vmn2r10K7N621 847 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 RbpjlO08674 515 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Slc32a1O35633 525 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Suv39h1O54864 412 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 GzmeP08884 248 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Prelid2Q0VBB0 177 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Bfsp2Q6NVD9 416 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Kcnk10Q8BUW1 535 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 MmaaQ8C7H1 415 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Mri1Q9CQT1 369 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Twist2Q9D030 160 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Zfp84Q9D654 559 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 AnkhQ9JHZ2 492 aa15.57■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm21149A0A0G2JFY7 255 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Zfp600A2A7V0 737 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Zcchc7B1AX39 541 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Zfp738B8JJX8 793 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 4930579F01RikE9Q3L6 325 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm11239E9Q5Z9 360 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm11237F2Z3W5 360 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm11238F2Z478 360 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Speer4eK7N6S8 255 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm17019K7N6W5 255 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Sox3P53784 375 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm428Q3UTE2 360 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gm11487Q5RIS0 354 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Ddx5Q61656 614 aaKnown RBP15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Igsf5Q7TSN7 370 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Spon2Q8BMS2 330 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Zfpm2Q8CCH7 1151 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Lgals2Q9CQW5 130 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Rgs6Q9Z2H2 472 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 HnrnpfQ9Z2X1 415 aaKnown RBP15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Olfr1040A2ARY1 313 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Atxn2O70305 1285 aaKnown RBP15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 S100a6P14069 89 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Gpr3P35413 330 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Cav3P51637 151 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Rgs14P97492 547 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Pin1rt1Q3ULQ2 159 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Tmub2Q3V209 319 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Cep44Q5HZK1 386 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 ClpbQ60649 677 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 Tmem202Q80W35 275 aa15.56■□□□□ 0.08
Trim28-201ENSMUST00000005705 ToporsQ80Z37 1033 aa15.56■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms