RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CLDN2P57739 230 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 OR4D2P58180 307 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 PIGFQ07326 219 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 CSTF3Q12996 717 aaKnown RBP11.03□□□□□ -0.64
CLN6-217ENST00000636964 CCDC85BQ15834 202 aaPredicted RBP11.03□□□□□ -0.64
CLN6-217ENST00000636964 NDUFAF5Q5TEU4 345 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 GRHL2Q6ISB3 625 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 KIAA1324Q6UXG2 1013 aaKnown RBP11.03□□□□□ -0.64
CLN6-217ENST00000636964 PRR23BQ6ZRT6 265 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 UTS2BQ765I0 119 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 PDZD3Q86UT5 571 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 AURKBQ96GD4 344 aaPredicted RBP11.03□□□□□ -0.64
CLN6-217ENST00000636964 MOGAT1Q96PD6 335 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 GABRG3Q99928 467 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 ARPC2O15144 300 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 NARSO43776 548 aaKnown RBP11.03□□□□□ -0.64
CLN6-217ENST00000636964 IDH3BO43837 385 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 RASAL1O95294 804 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 FKBP9O95302 570 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 HSD17B1P14061 328 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 HTR1BP28222 390 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 TRIM23P36406 574 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 RPS13P62277 151 aaKnown RBP11.03□□□□□ -0.64
CLN6-217ENST00000636964 ADARB1P78563 741 aaKnown RBP11.03□□□□□ -0.64
CLN6-217ENST00000636964 PWP1Q13610 501 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 SLBPQ14493 270 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLN6-217ENST00000636964 LRIT3Q3SXY7 679 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 ATAD3BQ5T9A4 648 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 GALNT13Q8IUC8 556 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 SLC44A3Q8N4M1 653 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 DPP10Q8N608 796 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 PACRGLQ8N7B6 248 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 RPLP0P6Q8NHW5 317 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 THUMPD3Q9BV44 507 aaKnown RBP11.03□□□□□ -0.64
CLN6-217ENST00000636964 C1QTNF2Q9BXJ5 285 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 IKZF5Q9H5V7 419 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 DYRK1BQ9Y463 629 aa11.03□□□□□ -0.64
CLN6-217ENST00000636964 PLRG1O43660 514 aaKnown RBP11.02□□□□□ -0.64
CLN6-217ENST00000636964 TGFB1P01137 390 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 BMP4P12644 408 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 POU2F1P14859 743 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 IGFALSP35858 605 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 HNF4AP41235 474 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 MAPK9P45984 424 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 CLDN8P56748 225 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 FOXM1Q08050 763 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 TBCELQ5QJ74 424 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 METRNLQ641Q3 311 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 ZNF773Q6PK81 442 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 TMEM92Q6UXU6 159 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 CEP68Q76N32 757 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 SYT12Q8IV01 421 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 C1orf52Q8N6N3 182 aaKnown RBP11.02□□□□□ -0.64
CLN6-217ENST00000636964 PJA1Q8NG27 643 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 OR7A2PQ8NGA2 310 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 CAPSLQ8WWF8 208 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 NRBF2Q96F24 287 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 INPP5KQ9BT40 448 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 RAD21L1Q9H4I0 556 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 PHPT1Q9NRX4 125 aaPredicted RBP11.02□□□□□ -0.64
CLN6-217ENST00000636964 CD207Q9UJ71 328 aa11.02□□□□□ -0.64
CLN6-217ENST00000636964 PRAMEF33A0A0G2JMD5 474 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 POM121BA6NF01 834 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 H0Y8X5 98 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 H0YIV9 168 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 UGDHO60701 494 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 IL6P05231 212 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 POLR2CP19387 275 aaPredicted RBP11.02□□□□□ -0.65
CLN6-217ENST00000636964 CXCR2P25025 360 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 S100A3P33764 101 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 CAPGP40121 348 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 MRPS15P82914 257 aaKnown RBP11.02□□□□□ -0.65
CLN6-217ENST00000636964 ACSM2AQ08AH3 577 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 CTF1Q16619 201 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 SNAP47Q5SQN1 464 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 IRAK1BP1Q5VVH5 260 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 ACSM2BQ68CK6 577 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 OR4F3Q6IEY1 312 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 ZNF704Q6ZNC4 412 aaPredicted RBP11.02□□□□□ -0.65
CLN6-217ENST00000636964 LRRC56Q8IYG6 542 aaPredicted RBP11.02□□□□□ -0.65
CLN6-217ENST00000636964 PHACTR4Q8IZ21 702 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 PARP8Q8N3A8 854 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 FBXO15Q8NCQ5 510 aaPredicted RBP11.02□□□□□ -0.65
CLN6-217ENST00000636964 RAD51AP1Q96B01 352 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 TBCDQ9BTW9 1192 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 FUNDC2Q9BWH2 189 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 SLC25A37Q9NYZ2 338 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 GPRC5BQ9NZH0 403 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 NEUROG3Q9Y4Z2 214 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 C1QCP02747 245 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 MT-ND1P03886 318 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 PRPS2P11908 318 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 CDH1P12830 882 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 PSMB5P28074 263 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 ACSL1P33121 698 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 ZNF846Q147U1 533 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 PCM1Q15154 2024 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 MED27Q6P2C8 311 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 FAM122CQ6P4D5 195 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 PLEKHG7Q6ZR37 379 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms