RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 TRAV17A0A0B4J275 112 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 CCDC189A1A4V9 331 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 A8MUI8 341 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 K7EPI3 171 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 F10P00742 488 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 ALDOAP04075 364 aaKnown RBP17.25■□□□□ 0.35
CLN6-214ENST00000636314 GFAPP14136 432 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 ECHS1P30084 290 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 TNFSF10P50591 281 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 PLA2G16P53816 162 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 TBCCQ15814 346 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 SP5Q6BEB4 398 aaPredicted RBP17.25■□□□□ 0.35
CLN6-214ENST00000636314 ADNP2Q6IQ32 1131 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 VN1R5Q7Z5H4 357 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 CEP112Q8N8E3 955 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 OR2L5Q8NG80 312 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 M1APQ8TC57 530 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 SLC44A1Q8WWI5 657 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 HAS2Q92819 552 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 REXO4Q9GZR2 422 aaKnown RBP17.25■□□□□ 0.35
CLN6-214ENST00000636314 RNF32Q9H0A6 362 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.25■□□□□ 0.352e-6■■■□□ 15
CLN6-214ENST00000636314 VPS11Q9H270 941 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 COPS7BQ9H9Q2 264 aaPredicted RBP17.25■□□□□ 0.35
CLN6-214ENST00000636314 MMP25Q9NPA2 562 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 PRDM9Q9NQV7 894 aa17.25■□□□□ 0.35
CLN6-214ENST00000636314 PRSS44E7EML9 344 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 B3GALT2O43825 422 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 KLHL2O95198 593 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 WDPCPO95876 746 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 MAOAP21397 527 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 MSH2P43246 934 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 SLC26A5P58743 744 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 BTG2P78543 158 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 TGM3Q08188 693 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 ACAP2Q15057 778 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 ADPRMQ3LIE5 342 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 FAM180AQ6UWF9 173 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 FJX1Q86VR8 437 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 CYP4X1Q8N118 509 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 ARMC2Q8NEN0 867 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 SUN3Q8TAQ9 357 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 ADAMTS18Q8TE60 1221 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 FAR1Q8WVX9 515 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 UBE2E3Q969T4 207 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 ZNF354BQ96LW1 612 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 PAFAH2Q99487 392 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 NPLQ9BXD5 320 aaPredicted RBP17.24■□□□□ 0.35
CLN6-214ENST00000636314 ABI3Q9P2A4 366 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 ZNF490Q9ULM2 529 aaPredicted RBP17.24■□□□□ 0.35
CLN6-214ENST00000636314 ANGPTL3Q9Y5C1 460 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 OTOGQ6ZRI0 2925 aa17.24■□□□□ 0.35
CLN6-214ENST00000636314 OR5H15A6NDH6 313 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 FAM227AF5H4B4 570 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 MTHFD2P13995 350 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 EPB42P16452 691 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 POU3F2P20265 443 aaPredicted RBP17.23■□□□□ 0.35
CLN6-214ENST00000636314 SERPINB9P50453 376 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 RAB38P57729 211 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 TAS2R50P59544 299 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 SETDB1Q15047 1291 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 INAQ16352 499 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 PFKFB4Q16877 469 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 FCRLBQ6BAA4 426 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 RPUSD3Q6P087 351 aaKnown RBP17.23■□□□□ 0.35
CLN6-214ENST00000636314 MED27Q6P2C8 311 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 SLC5A8Q8N695 610 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 TEX9Q8N6V9 391 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 STMN3Q9NZ72 180 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 MMACHCQ9Y4U1 282 aa17.23■□□□□ 0.35
CLN6-214ENST00000636314 A0A087WUV0 522 aaPredicted RBP17.22■□□□□ 0.35
CLN6-214ENST00000636314 IGKV3D-11A0A0A0MRZ8 115 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 A0A1B0GUH1 482 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 TCRBV16S1A1N1A0A5B0 115 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 SAGE2PA6NJ88 616 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 POC1B-GALNT4F8VUJ3 575 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 TBX6O95947 436 aaPredicted RBP17.22■□□□□ 0.35
CLN6-214ENST00000636314 PCNAP12004 261 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 CERS1P27544 350 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 CASP2P42575 452 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 ALDH18A1P54886 795 aaKnown RBP17.22■□□□□ 0.35
CLN6-214ENST00000636314 MTTPP55157 894 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 RUNX2Q13950 521 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 E2F2Q14209 437 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 MEP1AQ16819 746 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 ACER2Q5QJU3 275 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 H3F3CQ6NXT2 135 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 ABHD17CQ6PCB6 329 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 MYO7BQ6PIF6 2116 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 MYLK4Q86YV6 388 aaPredicted RBP17.22■□□□□ 0.35
CLN6-214ENST00000636314 CRLF3Q8IUI8 442 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 MCEMP1Q8IX19 187 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 BEST3Q8N1M1 668 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 FAM47BQ8NA70 645 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 UHMK1Q8TAS1 419 aaKnown RBP17.22■□□□□ 0.35
CLN6-214ENST00000636314 QRFPRQ96P65 431 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 KCNC2Q96PR1 638 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 SERINC2Q96SA4 455 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 RUBCNLQ9H714 662 aa17.22■□□□□ 0.35
CLN6-214ENST00000636314 NECTIN3Q9NQS3 549 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms