RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 CXCR6O00574 342 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 BCKDKO14874 412 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 HS6ST1O60243 411 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 DFNA5O60443 496 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 RASGRP1O95267 797 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 FKBP9O95302 570 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 ANGPTL1O95841 491 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 TSPAN12O95859 305 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 OTCP00480 354 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 ZNF883P0CG24 379 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 S100A1P23297 94 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 PPP5CP53041 499 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 LIMK1P53667 647 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 ERVPABLB-1P60509 514 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 HNRNPKP61978 463 aaKnown RBP eCLIP14.85□□□□□ -0.03
CLN8-209ENST00000635970 NR6A1Q15406 480 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 MAPKAPK3Q16644 382 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 NDUFA5Q16718 116 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 AP5B1Q2VPB7 878 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 ZRANB3Q5FWF4 1079 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 GPRC6AQ5T6X5 926 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 PSAPL1Q6NUJ1 521 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 SPESP1Q6UW49 350 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 KANSL1Q7Z3B3 1105 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 P2RY8Q86VZ1 359 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 SLC25A45Q8N413 288 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 CCL4L1Q8NHW4 92 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 FBXO30Q8TB52 745 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 GTF2H4Q92759 462 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 CAMK1GQ96NX5 476 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 THUMPD3Q9BV44 507 aaKnown RBP14.85□□□□□ -0.03
CLN8-209ENST00000635970 TMEM168Q9H0V1 697 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 OR2AG1Q9H205 316 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 ASIC5Q9NY37 505 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 IKZF3Q9UKT9 509 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 ZNF232Q9UNY5 417 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 UGT2A1Q9Y4X1 527 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 ARID1BQ8NFD5 2236 aaPredicted RBP14.84□□□□□ -0.03
CLN8-209ENST00000635970 SAGE2PA6NJ88 616 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 FAM220BPB1ANY3 271 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 PTGES3LE9PB15 166 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 H3BM21 787 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 TNFRSF10CO14798 259 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 FFAR2O15552 330 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 NOBOXO60393 691 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 NADKO95544 446 aaPredicted RBP14.84□□□□□ -0.03
CLN8-209ENST00000635970 ZNF8P17098 575 aaPredicted RBP14.84□□□□□ -0.03
CLN8-209ENST00000635970 ARHGDIAP52565 204 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 HNRNPFP52597 415 aaKnown RBP14.84□□□□□ -0.03
CLN8-209ENST00000635970 CSNK2BP67870 215 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 TUBA1BP68363 451 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 FADDQ13158 208 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 RSPO4Q2I0M5 234 aaPredicted RBP14.84□□□□□ -0.03
CLN8-209ENST00000635970 SHQ1Q6PI26 577 aaKnown RBP14.84□□□□□ -0.03
CLN8-209ENST00000635970 ENPP6Q6UWR7 440 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 TUBA1AQ71U36 451 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 PIANPQ8IYJ0 282 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 MICU2Q8IYU8 434 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 DYNC2LI1Q8TCX1 351 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 LMX1AQ8TE12 382 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 ZFP90Q8TF47 636 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 ZNF300Q96RE9 604 aaPredicted RBP14.84□□□□□ -0.03
CLN8-209ENST00000635970 C19orf43Q9BQ61 176 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 CCDC90BQ9GZT6 254 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 CLPBQ9H078 707 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 PAK1IP1Q9NWT1 392 aaPredicted RBP14.84□□□□□ -0.03
CLN8-209ENST00000635970 VAPAQ9P0L0 249 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 CRLS1Q9UJA2 301 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 CDV3Q9UKY7 258 aaKnown RBP14.84□□□□□ -0.03
CLN8-209ENST00000635970 NEUROG3Q9Y4Z2 214 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 SLC28A1O00337 649 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 RGS14O43566 566 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 PCDHGA12O60330 932 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 TNFP01375 233 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 CAPN1P07384 714 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 ITGALP20701 1170 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 AGXTP21549 392 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 RUNDC3AQ59EK9 446 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 LDLRAP1Q5SW96 308 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 CAPN13Q6MZZ7 669 aaPredicted RBP14.84□□□□□ -0.03
CLN8-209ENST00000635970 METTL2BQ6P1Q9 378 aaKnown RBP14.84□□□□□ -0.03
CLN8-209ENST00000635970 SCIMPQ6UWF3 145 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 CCDC80Q76M96 950 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 SNX20Q7Z614 316 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 ZBTB46Q86UZ6 589 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 OR10A6Q8NH74 314 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 RHOXF1Q8NHV9 184 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 MCOLN3Q8TDD5 553 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 STARD8Q92502 1023 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 SGCDQ92629 289 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 GLMNQ92990 594 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 RHBDF1Q96CC6 855 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 APOL4Q9BPW4 351 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 TRIM39Q9HCM9 518 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.84□□□□□ -0.03
CLN8-209ENST00000635970 TSC22D4Q9Y3Q8 395 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 PLEKHM1Q9Y4G2 1056 aa14.84□□□□□ -0.03
CLN8-209ENST00000635970 NCF1BA6NI72 391 aaPredicted RBP14.83□□□□□ -0.04
CLN8-209ENST00000635970 CLDN24A6NM45 220 aa14.83□□□□□ -0.04
CLN8-209ENST00000635970 AGAP14A8MT82 685 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms