RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 ZNF763Q0D2J5 394 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 HTR4Q13639 388 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 OR52E8Q6IFG1 317 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 ABRAXAS1Q6UWZ7 409 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 ZNF621Q6ZSS3 439 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 USP30Q70CQ3 517 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 PAGE2Q7Z2X7 111 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CPOQ8IVL8 374 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 METTL4Q8N3J2 472 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 RNF175Q8N4F7 328 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CBR4Q8N4T8 237 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 NATD1Q8N6N6 113 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 ANKK1Q8NFD2 765 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 OR7A2PQ8NGA2 310 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CDC26Q8NHZ8 85 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 NCLNQ969V3 563 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 MIEF2Q96C03 454 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 SDCCAG3Q96C92 435 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 ERLEC1Q96DZ1 483 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 QRFPRQ96P65 431 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TRAPPC9Q96Q05 1148 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 PHF12Q96QT6 1004 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 SLC29A1Q99808 456 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 INPP5KQ9BT40 448 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 MS4A5Q9H3V2 200 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 REEP4Q9H6H4 257 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 C14orf119Q9NWQ9 140 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 HPF1Q9NWY4 346 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 NEUROG3Q9Y4Z2 214 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 PCDHB11Q9Y5F2 797 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 HEBP2Q9Y5Z4 205 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TRANK1O15050 2925 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TRPM6Q9BX84 2022 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TBC1D3DA0A087WVF3 549 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TBC1D3IA0A087WXS9 549 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TBC1D3EA0A087X179 549 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TBC1D3KA0A087X1G2 549 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 C7orf72A4D263 438 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TBC1D3FA6NER0 549 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TBC1D3LB9A6J9 549 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 RNASET2O00584 256 aaKnown RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 SEMA3DO95025 777 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CCNDBP1O95273 360 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 KLF8O95600 359 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CPSF4O95639 269 aaKnown RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TBC1D3HP0C7X1 549 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 ACADMP11310 421 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 HOXB2P14652 356 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 HOXB9P17482 250 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CKMT2P17540 419 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 IDSP22304 550 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 PTPN6P29350 595 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 GSTM5P46439 218 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 GZMMP51124 257 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CLCNKAP51800 687 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 NHLH1Q02575 133 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 KRT33BQ14525 404 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 RBBP5Q15291 538 aaKnown RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 KRTCAP3Q53RY4 240 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TMEM196Q5HYL7 178 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CPZQ66K79 652 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TBC1D3GQ6DHY5 549 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TBC1D3CQ6IPX1 549 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 KRT80Q6KB66 452 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 IKBIPQ70UQ0 350 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 ANKRD46Q86W74 232 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CACUL1Q86Y37 369 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TBC1D3Q8IZP1 549 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TRIML2Q8N7C3 387 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 SLC47A1Q96FL8 570 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 SIPA1Q96FS4 1042 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 VPS50Q96JG6 964 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TBCDQ9BTW9 1192 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 APOOQ9BUR5 198 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 RHBGQ9H310 441 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 RAD21L1Q9H4I0 556 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 MVB12BQ9H7P6 319 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 ZNF696Q9H7X3 374 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CD320Q9NPF0 282 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 C11orf16Q9NQ32 467 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 DCAF13Q9NV06 445 aaKnown RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 DNAJB9Q9UBS3 223 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 ZNF282Q9UDV7 671 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 SERGEFQ9UGK8 458 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 RPS6KA6Q9UK32 745 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 PADI4Q9UM07 663 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 VPS4AQ9UN37 437 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 C19orf53Q9UNZ5 99 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 USP22Q9UPT9 525 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 SAMD4AQ9UPU9 718 aaKnown RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 SLC17A4Q9Y2C5 497 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 NOSIPQ9Y314 301 aaKnown RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 OR1A2Q9Y585 309 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 GMEB1Q9Y692 573 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 COL4A3Q01955 1670 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 GABRR3A8MPY1 467 aa6.84□□□□□ -1.31
BRCA1-230ENST00000634433 SOCS2O14508 198 aa6.84□□□□□ -1.31
BRCA1-230ENST00000634433 SCN2BO60939 215 aa6.84□□□□□ -1.31
BRCA1-230ENST00000634433 ETHE1O95571 254 aa6.84□□□□□ -1.31
BRCA1-230ENST00000634433 TGFB1P01137 390 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms