RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 GPR32O75388 356 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 CSF2RAP15509 400 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 PTGR1Q14914 329 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 TECRLQ5HYJ1 363 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 SPIN3Q5JUX0 258 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 NIPAL1Q6NVV3 410 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 ASPGQ86U10 573 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 WDTC1Q8N5D0 677 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 KRTCAP2Q8N6L1 136 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 MFSD2AQ8NA29 543 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 OR5P2Q8WZ92 322 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 DPAGT1Q9H3H5 408 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 RETREG1Q9H6L5 497 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 UCKL1Q9NWZ5 548 aa12.34□□□□□ -0.43
SCN8A-209ENST00000627620 ZNF840PA6NDX5 716 aa12.33□□□□□ -0.43
SCN8A-209ENST00000627620 PROM1O43490 865 aa12.33□□□□□ -0.43
SCN8A-209ENST00000627620 IL3P08700 152 aa12.33□□□□□ -0.43
SCN8A-209ENST00000627620 OR12D1P0DN82 309 aa12.33□□□□□ -0.43
SCN8A-209ENST00000627620 OCLNQ16625 522 aa12.33□□□□□ -0.43
SCN8A-209ENST00000627620 C12orf76Q8N812 135 aaPredicted RBP12.33□□□□□ -0.43
SCN8A-209ENST00000627620 ZDHHC12Q96GR4 267 aa12.33□□□□□ -0.43
SCN8A-209ENST00000627620 WDR92Q96MX6 357 aa12.33□□□□□ -0.43
SCN8A-209ENST00000627620 IFT52Q9Y366 437 aa12.33□□□□□ -0.43
SCN8A-209ENST00000627620 ZSCAN5BA6NJL1 495 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 XPNPEP2O43895 674 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 MT-ND5P03915 603 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 CD9P21926 228 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 SLC15A1P46059 708 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 MLLT10P55197 1068 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 RIN1Q13671 783 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 TUBA3CQ13748 450 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 SFT2D3Q587I9 215 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 TUBA3EQ6PEY2 450 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 CHRDL2Q6WN34 429 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCN8A-209ENST00000627620 SHKBP1Q8TBC3 707 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 SHISA4Q96DD7 197 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 PRODH2Q9UF12 536 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 SPEF2Q9C093 1822 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 MON2Q7Z3U7 1717 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 ABCC6O95255 1503 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 MAFKO60675 156 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 IL33O95760 270 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 PFKLP17858 780 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 MAPK3P27361 379 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-209ENST00000627620 TAS2R43P59537 309 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 PYHIN1Q6K0P9 492 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 RHEBL1Q8TAI7 183 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 GAL3ST3Q96A11 431 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 PTCHD1Q96NR3 888 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 POLDIP3Q9BY77 421 aaKnown RBP12.33□□□□□ -0.44
SCN8A-209ENST00000627620 NFS1Q9Y697 457 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 S1PR4O95977 384 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 F8A1P23610 371 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 ARPC4P59998 168 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 SLC10A2Q12908 348 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-209ENST00000627620 ANKDD1AQ495B1 522 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 AMIGO3Q86WK7 504 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 OR8J3Q8NGG0 315 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 JPH3Q8WXH2 748 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-209ENST00000627620 TTTY10Q9BZA0 68 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 A0A096LPI6 279 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 OR6C74A6NCV1 312 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 SCGB1D2O95969 90 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 ALDOAP04075 364 aaKnown RBP12.33□□□□□ -0.44
SCN8A-209ENST00000627620 HNRNPA1P09651 372 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCN8A-209ENST00000627620 JMJD7P0C870 316 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 GABRA3P34903 492 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 GRK5P34947 590 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF550Q7Z398 422 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 TSPEARQ8WU66 669 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 MR1Q95460 341 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 EHD1Q9H4M9 534 aa12.33□□□□□ -0.44
SCN8A-209ENST00000627620 EXOSC1Q9Y3B2 195 aaKnown RBP12.33□□□□□ -0.44
SCN8A-209ENST00000627620 TTC34A8MYJ7 566 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 RNGTTO60942 597 aaKnown RBP12.32□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF821O75541 412 aaPredicted RBP12.32□□□□□ -0.44
SCN8A-209ENST00000627620 STC2O76061 302 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 ARSFP54793 590 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 GRB7Q14451 532 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 GINS1Q14691 196 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 ATG9BQ674R7 924 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 CARM1Q86X55 608 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 GATSQ8NAP1 163 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 CPNE2Q96FN4 548 aaPredicted RBP12.32□□□□□ -0.44
SCN8A-209ENST00000627620 TEPSINQ96N21 525 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 TRIB3Q96RU7 358 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 PAAF1Q9BRP4 392 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 CREBZFQ9NS37 354 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 LOC100509620A0A075B734 347 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 HTR3EA5X5Y0 456 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 SDHDO14521 159 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 CYP17A1P05093 508 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 VAMP1P23763 118 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 TIA1P31483 386 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCN8A-209ENST00000627620 DNASE1L3Q13609 305 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 ZFAND4Q86XD8 727 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 FOXRED2Q8IWF2 684 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 RANBP9Q96S59 729 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 FAM129BQ96TA1 746 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms