RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 PGS1Q32NB8 556 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 TRMT5Q32P41 509 aaKnown RBP13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 PAGE3Q5JUK9 113 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 WASHC2DQ5SRD0 308 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 NIPAL1Q6NVV3 410 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 C8orf82Q6P1X6 216 aaPredicted RBP13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 PRMT9Q6P2P2 845 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 D2HGDHQ8N465 521 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 OR7A2PQ8NGA2 310 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 IFI44Q8TCB0 444 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 SLC41A2Q96JW4 573 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 SERINC2Q96SA4 455 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 LRFN3Q9BTN0 628 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 THTPAQ9BU02 230 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 FAIM2Q9BWQ8 316 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 LYARQ9NX58 379 aaKnown RBP13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 PDP2Q9P2J9 529 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 KLHL3Q9UH77 587 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 EXO1Q9UQ84 846 aaKnown RBP13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 RP1P56715 2156 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 A0A1W2PQM1 296 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 C4orf51C9J302 202 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 LRP3O75074 770 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 KCNH1O95259 989 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 RPLP0P05388 317 aaKnown RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 GP1BAP07359 652 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 IL3P08700 152 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 ANKRD34CP0C6C1 535 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 PIM1P11309 404 aaPredicted RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 CKMT2P17540 419 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 ALOX12P18054 663 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 HNRNPFP52597 415 aaKnown RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 BTN3A2P78410 334 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 SLAMF1Q13291 335 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 TMTC4Q5T4D3 741 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 ANXA8L1Q5VT79 327 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 GARNL3Q5VVW2 1013 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 OR4D9Q8NGE8 314 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 OR8K5Q8NH50 307 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 NUDT8Q8WV74 236 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 KLHL6Q8WZ60 621 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 GTF2H4Q92759 462 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 PPCDCQ96CD2 204 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 LRRC58Q96CX6 371 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 ITCHQ96J02 903 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 NUDT22Q9BRQ3 303 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 DUSP26Q9BV47 211 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 BHLHE41Q9C0J9 482 aaPredicted RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 ZNF768Q9H5H4 540 aaKnown RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 SPAG4Q9NPE6 437 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 MIEF1Q9NQG6 463 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 SH3BP4Q9P0V3 963 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 MAN2B2Q9Y2E5 1009 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 BTBD3Q9Y2F9 522 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 PCDHGA7Q9Y5G6 932 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 COL5A1P20908 1838 aaPredicted RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 UNC13CQ8NB66 2214 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 ASXL3Q9C0F0 2248 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 C15orf38-AP3S2A0A0A6YYH1 394 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 A0A0G2JN53 185 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 PRSS51A0A1B0GVH4 220 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 CDX4O14627 284 aaPredicted RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 HCRTR1O43613 425 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 ERN1O75460 977 aaKnown RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 LDOC1O95751 146 aaPredicted RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 NELFEP18615 380 aaKnown RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 ACP1P24666 158 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 EMP3P54852 163 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 PSME3P61289 254 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 SKP1P63208 163 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 PHC1P78364 1004 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 CCL7P80098 99 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 NDUFA9Q16795 377 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 PRTGQ2VWP7 1150 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 DEFB110Q30KQ9 67 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 OR4F3Q6IEY1 312 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 SLC2A7Q6PXP3 512 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 BNC2Q6ZN30 1099 aaPredicted RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 RIPOR1Q6ZS17 1223 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 ARPINQ7Z6K5 226 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 SCUBE1Q8IWY4 988 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 RHBDD1Q8TEB9 315 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 UTP4Q969X6 686 aaKnown RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 CNDP2Q96KP4 475 aaKnown RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 GPATCH1Q9BRR8 931 aaKnown RBP13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 MS4A12Q9NXJ0 267 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 TAS2R7Q9NYW3 318 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 EHD3Q9NZN3 535 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 TMEM9Q9P0T7 183 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 ASB4Q9Y574 426 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 CACNA1HO95180 2353 aa13.5□□□□□ -0.25
CLTCL1-212ENST00000622493 FITM1A5D6W6 292 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 FXYD1O00168 92 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 RNASET2O00584 256 aaKnown RBP13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 B3GALT2O43825 422 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 SCN2BO60939 215 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 LAMP1P11279 417 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 CERS1P27544 350 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 TRPC1P48995 793 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 FAM53BQ14153 422 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms