RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 SYPP08247 313 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 CBSLP0DN79 551 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 HK1P19367 917 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 CBSP35520 551 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 CLCN5P51795 746 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 NR0B1P51843 470 aaKnown RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 MLLT1Q03111 559 aaPredicted RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 CRHR2Q13324 411 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 PEA15Q15121 130 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 PTPRRQ15256 657 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 TAF1CQ15572 869 aaPredicted RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 EIF2S3LQ2VIR3 472 aaKnown RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 HECTD2Q5U5R9 776 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 SMYD5Q6GMV2 418 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 ETFRF1Q6IPR1 90 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 ZNF534Q76KX8 674 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 SPATA2LQ8IUW3 424 aaPredicted RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 KIAA0319LQ8IZA0 1049 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 B3GNT7Q8NFL0 401 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 STOML3Q8TAV4 291 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 CERKQ8TCT0 537 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 SCARB1Q8WTV0 552 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 TBL1YQ9BQ87 522 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 ZNF471Q9BX82 626 aaPredicted RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 B3GNT5Q9BYG0 378 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 OR51M1Q9H341 326 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 EIF2B3Q9NR50 452 aaKnown RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 SDR39U1Q9NRG7 319 aaPredicted RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 DNAJC27Q9NZQ0 273 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 PSORS1C1Q9UIG5 152 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 TSPAN16Q9UKR8 245 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 FAM50BQ9Y247 325 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 LACTBL1A8MY62 500 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 FAM220BPB1ANY3 271 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 DGAT1O75907 488 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 SNAPINO95295 136 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 POMCP01189 267 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 CLUP10909 449 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 HOXD8P13378 290 aaPredicted RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 HPGDP15428 266 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 GIFP27352 417 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 CLCNKAP51800 687 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 TAF1AQ15573 450 aaPredicted RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 ALG11Q2TAA5 492 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 RAB6CQ53S08 254 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 COQ5Q5HYK3 327 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 OR2B11Q5JQS5 317 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 SLC27A4Q6P1M0 643 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 TRMT11Q7Z4G4 463 aaKnown RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 GALNT10Q86SR1 603 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 RNF180Q86T96 592 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 PDZD3Q86UT5 571 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 PTRH1Q86Y79 214 aaKnown RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 C12orf29Q8N999 325 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 OR10H5Q8NGA6 315 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 UPRTQ96BW1 309 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 FCRL1Q96LA6 429 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 FIZ1Q96SL8 496 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 NELL2Q99435 816 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 TMED9Q9BVK6 235 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 ARHGAP39Q9C0H5 1083 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 RAB6CQ9H0N0 254 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 EVA1AQ9H8M9 152 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 UNKLQ9H9P5 680 aaKnown RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 GBA2Q9HCG7 927 aaPredicted RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 SMPD4Q9NXE4 827 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 TEX10Q9NXF1 929 aaPredicted RBP7.12□□□□□ -1.27
PDE6A-205ENST00000617647 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
PDE6A-205ENST00000617647 SLC35F4A4IF30 521 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 RFXANKO14593 260 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 CHP2O43745 196 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 TSPAN3O60637 253 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 NDUFS3O75489 264 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 GPX5O75715 221 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 LRATO95237 230 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 LPLP06858 475 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 NFYAP23511 347 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 CLCN7P51798 805 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 AFF1P51825 1210 aaKnown RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 SYPL2Q5VXT5 272 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ZNF772Q68DY9 489 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 RGMBQ6NW40 437 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 CBLN2Q8IUK8 224 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ADGRF3Q8IZF5 1079 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 PYROXD2Q8N2H3 581 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 DNAJC22Q8N4W6 341 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 PXT1Q8NFP0 134 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 RNF139Q8WU17 664 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ACOT11Q8WXI4 607 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ARNTL2Q8WYA1 636 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 POP5Q969H6 163 aaKnown RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 RBP7Q96R05 134 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 MAP3K3Q99759 626 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 SAP130Q9H0E3 1048 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 PRDM5Q9NQX1 630 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 H2AFY2Q9P0M6 372 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 CPA4Q9UI42 421 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 PURGQ9UJV8 347 aaKnown RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 TINAGQ9UJW2 476 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 TUBAL3A6NHL2 446 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms