RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 ISL1P61371 349 aa15□□□□□ -0.01
NR1H3-235ENST00000616973 SCARB2Q14108 478 aa15□□□□□ -0.01
NR1H3-235ENST00000616973 SLC5A12Q1EHB4 618 aa15□□□□□ -0.01
NR1H3-235ENST00000616973 C6orf141Q5SZD1 244 aa15□□□□□ -0.01
NR1H3-235ENST00000616973 CHDHQ8NE62 594 aaPredicted RBP15□□□□□ -0.01
NR1H3-235ENST00000616973 CREB3L4Q8TEY5 395 aa15□□□□□ -0.01
NR1H3-235ENST00000616973 FBLIM1Q8WUP2 373 aa15□□□□□ -0.01
NR1H3-235ENST00000616973 EPYCQ99645 322 aa15□□□□□ -0.01
NR1H3-235ENST00000616973 DDX31Q9H8H2 851 aaKnown RBP15□□□□□ -0.01
NR1H3-235ENST00000616973 SAMHD1Q9Y3Z3 626 aaKnown RBP15□□□□□ -0.01
NR1H3-235ENST00000616973 PLEKHM1Q9Y4G2 1056 aa15□□□□□ -0.01
NR1H3-235ENST00000616973 GPSM3Q9Y4H4 160 aa15□□□□□ -0.01
NR1H3-235ENST00000616973 HEBP2Q9Y5Z4 205 aa15□□□□□ -0.01
NR1H3-235ENST00000616973 HSPE1-MOB4S4R3N1 261 aa15□□□□□ -0.01
NR1H3-235ENST00000616973 SNRNP200O75643 2136 aaKnown RBP14.99□□□□□ -0.01
NR1H3-235ENST00000616973 IGKV1-8A0A0C4DH67 115 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 MYO1GB0I1T2 1018 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 RTCAO00442 366 aaKnown RBP14.99□□□□□ -0.01
NR1H3-235ENST00000616973 LATO43561 262 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 LCMT2O60294 686 aaKnown RBP14.99□□□□□ -0.01
NR1H3-235ENST00000616973 KDM1AO60341 852 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 JRKO75564 520 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 CPNE6O95741 557 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 IFNA14P01570 189 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 C9P02748 559 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 CRHBPP24387 322 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 PRIM2P49643 509 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 TPD52P55327 224 aaPredicted RBP14.99□□□□□ -0.01
NR1H3-235ENST00000616973 ABATP80404 500 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 CDK6Q00534 326 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 TMEM35AQ53FP2 167 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 CRB2Q5IJ48 1285 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 RNF130Q86XS8 419 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 MMP21Q8N119 569 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 DENND6BQ8NEG7 585 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 OR52E1Q8NGJ3 308 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 MPP4Q96JB8 637 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 CNDP2Q96KP4 475 aaKnown RBP14.99□□□□□ -0.01
NR1H3-235ENST00000616973 BARD1Q99728 777 aaKnown RBP14.99□□□□□ -0.01
NR1H3-235ENST00000616973 NLNQ9BYT8 704 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 KIR3DX1Q9H7L2 352 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 TRPV5Q9NQA5 729 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 TMEM184CQ9NVA4 438 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 ACSL6Q9UKU0 697 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 NCKAP1Q9Y2A7 1128 aa14.99□□□□□ -0.01
NR1H3-235ENST00000616973 RANBP2P49792 3224 aaKnown RBP14.99□□□□□ -0.01
NR1H3-235ENST00000616973 DRD1P21728 446 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 MAT2AP31153 395 aaKnown RBP14.98□□□□□ -0.01
NR1H3-235ENST00000616973 SLC5A2P31639 672 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 ARFIP1P53367 373 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 PPP2CBP62714 309 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 PPP2CAP67775 309 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 MRPS21P82921 87 aaKnown RBP14.98□□□□□ -0.01
NR1H3-235ENST00000616973 SFSWAPQ12872 951 aaKnown RBP14.98□□□□□ -0.01
NR1H3-235ENST00000616973 DYNC1I2Q13409 638 aaKnown RBP14.98□□□□□ -0.01
NR1H3-235ENST00000616973 KEAP1Q14145 624 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 KRT33BQ14525 404 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 SKIV2LQ15477 1246 aaKnown RBP14.98□□□□□ -0.01
NR1H3-235ENST00000616973 ZIC1Q15915 447 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 RPE65Q16518 533 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 BROXQ5VW32 411 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 SAXO2Q658L1 398 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 FAHD1Q6P587 224 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 KCTD8Q6ZWB6 473 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 UBE3DQ7Z6J8 389 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 ZC3H7AQ8IWR0 971 aaKnown RBP14.98□□□□□ -0.01
NR1H3-235ENST00000616973 SETD9Q8NE22 299 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 NFKBIDQ8NI38 313 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 LZICQ8WZA0 190 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 SIPA1Q96FS4 1042 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 SARGQ9BW04 601 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 XKR8Q9H6D3 395 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 CXorf36Q9H7Y0 433 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 NEUROD4Q9HD90 331 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 FZD3Q9NPG1 666 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 TAS2R7Q9NYW3 318 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 MOSPD1Q9UJG1 213 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 BLOC1S6Q9UL45 172 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 PCDHGB3Q9Y5G1 929 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 MDC1Q14676 2089 aaKnown RBP14.98□□□□□ -0.01
NR1H3-235ENST00000616973 PRSS38A1L453 326 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 PDZK1P1A8MUH7 402 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 BCKDKO14874 412 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 PDPK1O15530 556 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 ABCB7O75027 752 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 DIRAS1O95057 198 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 AQP1P29972 269 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 SOAT1P35610 550 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 YAP1P46937 504 aaKnown RBP14.98□□□□□ -0.01
NR1H3-235ENST00000616973 PCBP3P57721 371 aaKnown RBP14.98□□□□□ -0.01
NR1H3-235ENST00000616973 PCBP4P57723 403 aaKnown RBP14.98□□□□□ -0.01
NR1H3-235ENST00000616973 CD47Q08722 323 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 MLC1Q15049 377 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 CTU2Q2VPK5 515 aaKnown RBP14.98□□□□□ -0.01
NR1H3-235ENST00000616973 IFI44LQ53G44 452 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 OR4C11Q6IEV9 310 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 WASH2PQ6VEQ5 465 aa14.98□□□□□ -0.01
NR1H3-235ENST00000616973 TSEN54Q7Z6J9 526 aaKnown RBP14.98□□□□□ -0.01
NR1H3-235ENST00000616973 ERI1Q8IV48 349 aaKnown RBP14.98□□□□□ -0.01
NR1H3-235ENST00000616973 OR5AK3PQ8NH89 298 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms