RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 GPC1P35052 558 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 BMPR1AP36894 532 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 PRKCDQ05655 676 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 TBCEQ15813 527 aaPredicted RBP13.79□□□□□ -0.2
EPHB4-210ENST00000616502 BCL2A1Q16548 175 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 WDR45BQ5MNZ6 344 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 CAPN13Q6MZZ7 669 aaPredicted RBP13.79□□□□□ -0.2
EPHB4-210ENST00000616502 SLC39A5Q6ZMH5 540 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 ZNF438Q7Z4V0 828 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 HMGN2P46Q86SG4 172 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 CCDC28AQ8IWP9 274 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 DNAJB8Q8NHS0 232 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 RASSF5Q8WWW0 418 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 TMEM159Q96B96 161 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 DOHHQ9BU89 302 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 MAT2BQ9NZL9 334 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 H2AFY2Q9P0M6 372 aaPredicted RBP13.79□□□□□ -0.2
EPHB4-210ENST00000616502 ENOPH1Q9UHY7 261 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 PSORS1C1Q9UIG5 152 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 MAPRE3Q9UPY8 281 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 CMAHPQ9Y471 501 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 PCDHGA6Q9Y5G7 932 aa13.79□□□□□ -0.2
EPHB4-210ENST00000616502 A0A1W2PQL4 384 aaPredicted RBP13.78□□□□□ -0.2
EPHB4-210ENST00000616502 PCP4L1A6NKN8 68 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 HIDE1A8MVS5 230 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 RPS3P23396 243 aaKnown RBP eCLIP13.78□□□□□ -0.24e-7■□□□□ 10.4
EPHB4-210ENST00000616502 UQCRC1P31930 480 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 GGT2P36268 569 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 HTR3AP46098 478 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 ST8SIA6P61647 398 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 IFITM2Q01629 132 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 SPHARQ15513 63 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 LAIR1Q6GTX8 287 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 TRIM40Q6P9F5 258 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 OR5H6Q8NGV6 325 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 LRRC20Q8TCA0 184 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 SLC35A5Q9BS91 424 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 NKIRAS2Q9NYR9 191 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 ZNF224Q9NZL3 707 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 NDRG4Q9ULP0 352 aaKnown RBP13.78□□□□□ -0.2
EPHB4-210ENST00000616502 OARD1Q9Y530 152 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 TRBC2A0A5B9 178 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 SMLR1H3BR10 107 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 TLR4O00206 839 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 TNFRSF10AO00220 468 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 TSPAN4O14817 238 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 TGM5O43548 720 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 CLTBP09497 229 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 HOXC13P31276 330 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 TALDO1P37837 337 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 CDC20Q12834 499 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 TARDBPQ13148 414 aaKnown RBP eCLIP13.78□□□□□ -0.2
EPHB4-210ENST00000616502 GBX1Q14549 363 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 TRIM71Q2Q1W2 868 aaKnown RBP13.78□□□□□ -0.2
EPHB4-210ENST00000616502 CCDC149Q6ZUS6 474 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 PCNPQ8WW12 178 aaKnown RBP13.78□□□□□ -0.2
EPHB4-210ENST00000616502 ISG20Q96AZ6 181 aaKnown RBP13.78□□□□□ -0.2
EPHB4-210ENST00000616502 PPCDCQ96CD2 204 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 UCK2Q9BZX2 261 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 ANKRA2Q9H9E1 313 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 CXXC1Q9P0U4 656 aaPredicted RBP13.78□□□□□ -0.2
EPHB4-210ENST00000616502 TBC1D3BA6NDS4 549 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 ARHGAP33O14559 1287 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 WBP4O75554 376 aaKnown RBP13.78□□□□□ -0.2
EPHB4-210ENST00000616502 TSPAN12O95859 305 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 C1QCP02747 245 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 STATHP02808 62 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 ACPPP15309 386 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 JUNDP17535 347 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 ATF4P18848 351 aaPredicted RBP13.78□□□□□ -0.2
EPHB4-210ENST00000616502 CAV3P56539 151 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 CDK10Q15131 360 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 LEXMQ3ZCV2 418 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 C9orf43Q8TAL5 461 aaPredicted RBP13.78□□□□□ -0.2
EPHB4-210ENST00000616502 KLHL6Q8WZ60 621 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 CEP295NLQ96MC4 621 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 NIPSNAP1Q9BPW8 284 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 SPRTNQ9H040 489 aaPredicted RBP13.78□□□□□ -0.2
EPHB4-210ENST00000616502 POLR2J3Q9H1A7 115 aaKnown RBP13.78□□□□□ -0.2
EPHB4-210ENST00000616502 MED16Q9Y2X0 877 aa13.78□□□□□ -0.2
EPHB4-210ENST00000616502 CFAP20Q9Y6A4 193 aaKnown RBP13.78□□□□□ -0.2
EPHB4-210ENST00000616502 FAM227AF5H4B4 570 aa13.77□□□□□ -0.2
EPHB4-210ENST00000616502 M0R082 166 aa13.77□□□□□ -0.2
EPHB4-210ENST00000616502 TAPBPO15533 448 aa13.77□□□□□ -0.2
EPHB4-210ENST00000616502 VIPR2P41587 438 aa13.77□□□□□ -0.2
EPHB4-210ENST00000616502 ZFP36L2P47974 494 aaKnown RBP13.77□□□□□ -0.2
EPHB4-210ENST00000616502 MAPK12P53778 367 aa13.77□□□□□ -0.2
EPHB4-210ENST00000616502 COX10Q12887 443 aa13.77□□□□□ -0.2
EPHB4-210ENST00000616502 NFATC2Q13469 925 aa13.77□□□□□ -0.2
EPHB4-210ENST00000616502 LRRC66Q68CR7 880 aa13.77□□□□□ -0.2
EPHB4-210ENST00000616502 RFPL4BQ6ZWI9 263 aa13.77□□□□□ -0.2
EPHB4-210ENST00000616502 DEDD2Q8WXF8 326 aa13.77□□□□□ -0.2
EPHB4-210ENST00000616502 TRPS1Q9UHF7 1281 aa13.77□□□□□ -0.2
EPHB4-210ENST00000616502 ANGPT4Q9Y264 503 aa13.77□□□□□ -0.2
EPHB4-210ENST00000616502 SEC16AO15027 2179 aa13.77□□□□□ -0.2
EPHB4-210ENST00000616502 WASH3PC4AMC7 463 aa13.77□□□□□ -0.21
EPHB4-210ENST00000616502 TGFB1P01137 390 aa13.77□□□□□ -0.21
EPHB4-210ENST00000616502 CSTF2P33240 577 aaKnown RBP eCLIP13.77□□□□□ -0.21
EPHB4-210ENST00000616502 GRK5P34947 590 aa13.77□□□□□ -0.21
EPHB4-210ENST00000616502 SPAM1P38567 509 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms