RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 BAIAP2Q9UQB8 552 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 TEX13CA0A0J9YWL9 993 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 TRBC2A0A5B9 178 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 FAM227AF5H4B4 570 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 PCDH17O14917 1159 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 AP1G1O43747 822 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 CPNE3O75131 537 aaKnown RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 ENGP17813 658 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 UBE2NP61088 152 aaKnown RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 TMEM53Q6P2H8 277 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 OPN5Q6U736 354 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 QSOX2Q6ZRP7 698 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 UBR3Q6ZT12 1888 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 TRIM74Q86UV6 250 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 CCDC103Q8IW40 242 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 GPALPP1Q8IXQ4 340 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR10Q1Q8NGQ4 319 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 ENKURQ8TC29 256 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 SORCS1Q8WY21 1168 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 FCGR1BQ92637 280 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 ARL5BQ96KC2 179 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 GORASP1Q9BQQ3 440 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 WDR45Q9Y484 360 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 BCKDKO14874 412 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 PRODHO43272 600 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 ASNA1O43681 348 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 ITGA10O75578 1167 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 CTHP32929 405 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 GSSP48637 474 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 CSNK2A1P68400 391 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 CDK6Q00534 326 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 ATG9BQ674R7 924 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 STEAP4Q687X5 459 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 CLNKQ7Z7G1 428 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 ALYREFQ86V81 257 aaKnown RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 WDTC1Q8N5D0 677 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 AMDHD1Q96NU7 426 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 GRIP2Q9C0E4 1043 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 CLK4Q9HAZ1 481 aaKnown RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 MKS1Q9NXB0 559 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 TOR4AQ9NXH8 423 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 MCTS1Q9ULC4 181 aaKnown RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 PIGBOS1A0A0B4J2F0 54 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 CIB4A0PJX0 185 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 SMNDC1O75940 238 aaKnown RBP eCLIP9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 PGM3O95394 542 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 CBX6O95503 412 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 CDH12P55289 794 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 RAB25P57735 213 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR2B6P58173 313 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 TAS2R43P59537 309 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 PMS2P3Q13401 168 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 TRAM2Q15035 370 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 NOXRED1Q6NXP6 359 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 LIPIQ6XZB0 460 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZNF781Q8N8C0 355 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 NUP43Q8NFH3 380 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 TWSG1Q9GZX9 223 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 AQP12BA6NM10 295 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 H0YC42 278 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 PTHP01270 115 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 ATP6V1B1P15313 513 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 NR4A1P22736 598 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 PRLHRP49683 370 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 SMSP52788 366 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 RHAGQ02094 409 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 ALG1LQ6GMV1 187 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 AQP12AQ8IXF9 295 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 ALDH16A1Q8IZ83 802 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 TMEM178AQ8NBL3 297 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR2L8Q8NGY9 312 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 OSTF1Q92882 214 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 PYCR2Q96C36 320 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 CENPNQ96H22 339 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 NUAK2Q9H093 628 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 CLEC4MQ9H2X3 399 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 XKR8Q9H6D3 395 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 COMMD9Q9P000 198 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 SCN4AP35499 1836 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 FAM72CH0Y354 149 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 HK1P19367 917 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 MAPK3P27361 379 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 IRF9Q00978 393 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 ABHD18Q0P651 414 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 EML3Q32P44 896 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 FAM72AQ5TYM5 149 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 RAET1LQ5VY80 246 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 FAM72DQ6L9T8 149 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 REEP3Q6NUK4 255 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 BTN2A1Q7KYR7 527 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 FAM72BQ86X60 149 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 BPIFB6Q8NFQ5 453 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 GRHL3Q8TE85 626 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 HAVCR1Q96D42 359 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 FAM117AQ9C073 453 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 FADS2O95864 444 aaKnown RBP9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 JUNP05412 331 aaKnown RBP9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 BCHEP06276 602 aa9.35□□□□□ -0.91
TNFRSF9-204ENST00000615230 RAB2AP61019 212 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms