RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	CNGA4	Q8IV77	575 aa		11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	ULK2	Q8IYT8	1036 aa		11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	SLC35B2	Q8TB61	432 aa		11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	ALG3	Q92685	438 aa		11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	CAPZA3	Q96KX2	299 aa		11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	RASL10B	Q96S79	203 aa		11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	SECISBP2	Q96T21	854 aa	Known RBP	11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	IL22	Q9GZX6	179 aa		11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	LIN28A	Q9H9Z2	209 aa	Known RBP	11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	CLK4	Q9HAZ1	481 aa	Known RBP	11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	TREX1	Q9NSU2	369 aa		11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	BFAR	Q9NZS9	450 aa		11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	MYOT	Q9UBF9	498 aa		11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	ZNF148	Q9UQR1	794 aa		11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	MMACHC	Q9Y4U1	282 aa		11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	PCDHA13	Q9Y5I0	950 aa		11.37	□□□□□ -0.59
NUP62-223	ENST00000601665	SON	P18583	2426 aa	Known RBP	11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	PABPN1L	A6NDY0	278 aa	Known RBP	11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	EEF1E1-BLOC1S5	C9J1V9	151 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	EEF1E1	O43324	174 aa	Known RBP	11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	DNASE1L1	P49184	302 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	CLCN7	P51798	805 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	RAB8A	P61006	207 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	SORD	Q00796	357 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	SLC13A2	Q13183	592 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	CBLB	Q13191	982 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	NAE1	Q13564	534 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	XKR6	Q5GH73	641 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	HSDL2	Q6YN16	418 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	YTHDF3	Q7Z739	585 aa	Known RBP	11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	PALM2	Q8IXS6	379 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	LRRC75A-AS1	Q8N1F1	130 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	UBL4B	Q8N7F7	174 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	CCDC89	Q8N998	374 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	PIGT	Q969N2	578 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	CALR3	Q96L12	384 aa	Known RBP	11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	SGCZ	Q96LD1	299 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	HAUS8	Q9BT25	410 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	AARSD1	Q9BTE6	412 aa	Known RBP	11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	TUBA8	Q9NY65	449 aa	Predicted RBP	11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	SPRR3	Q9UBC9	169 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	TRPS1	Q9UHF7	1281 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	ADAM21	Q9UKJ8	722 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	SH2B3	Q9UQQ2	575 aa		11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	EIF3L	Q9Y262	564 aa	Known RBP	11.36	□□□□□ -0.59
NUP62-223	ENST00000601665	CTAGE9	A4FU28	777 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	GFY	I3L273	518 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	AP3B1	O00203	1094 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	CLDN4	O14493	209 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	CASK	O14936	926 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	PRKN	O60260	465 aa	Predicted RBP	11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	HRG	P04196	525 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	IFNA16	P05015	189 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	OGN	P20774	298 aa	Known RBP	11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	AGTRAP	Q6RW13	159 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	OPN5	Q6U736	354 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	CES3	Q6UWW8	571 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	CXorf67	Q86X51	503 aa	Predicted RBP	11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	LACC1	Q8IV20	430 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	TMEM132C	Q8N3T6	1108 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	GOLM1	Q8NBJ4	401 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	NAXE	Q8NCW5	288 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	TNIP2	Q8NFZ5	429 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	UTP15	Q8TED0	518 aa	Known RBP	11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	ATG4A	Q8WYN0	398 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	HSPBAP1	Q96EW2	488 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	SCYL1	Q96KG9	808 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	SLC30A3	Q99726	388 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	ZNF223	Q9UK11	482 aa	Predicted RBP	11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	PCDHGB3	Q9Y5G1	929 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	CLCA3P	Q9Y6N3	262 aa		11.35	□□□□□ -0.59
NUP62-223	ENST00000601665	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	SYCE3	A1L190	88 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	TRIM64	A6NGJ6	449 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	TRIM64B	A6NI03	449 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	PAM	P19021	973 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	NPY2R	P49146	381 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	GPR143	P51810	404 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	KCNJ2	P63252	427 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	FOXO1	Q12778	655 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	SIX1	Q15475	284 aa	Predicted RBP	11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	HYAL4	Q2M3T9	481 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	LCTL	Q6UWM7	567 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	VSTM4	Q8IW00	320 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	NT5C	Q8TCD5	201 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	KIAA1191	Q96A73	305 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	MFSD3	Q96ES6	412 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	PERP	Q96FX8	193 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	FAR2	Q96K12	515 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	ADAP2	Q9NPF8	381 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	PRTFDC1	Q9NRG1	225 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	INTS10	Q9NVR2	710 aa	Known RBP	11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	TRMT1	Q9NXH9	659 aa	Known RBP	11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	KLHL42	Q9P2K6	505 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	ZFP69B	Q9UJL9	534 aa		11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	BOK	Q9UMX3	212 aa	Predicted RBP	11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms