RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 RPUSD3Q6P087 351 aaKnown RBP12.91□□□□□ -0.34
SCAF1-203ENST00000598359 BCORP1Q8N888 145 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 M1APQ8TC57 530 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 KIAA1191Q96A73 305 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 MS4A6EQ96DS6 147 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 SIGLEC12Q96PQ1 595 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 LPAR4Q99677 370 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 HES7Q9BYE0 225 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 NECTIN3Q9NQS3 549 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 OLAHQ9NV23 265 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 PTBP2Q9UKA9 531 aaKnown RBP12.91□□□□□ -0.34
SCAF1-203ENST00000598359 ZNF490Q9ULM2 529 aaPredicted RBP12.91□□□□□ -0.34
SCAF1-203ENST00000598359 LRIT2A6NDA9 550 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 URADA6NGE7 173 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 GOLGA6L10A6NI86 522 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 SUPT3HB4E1H0 165 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 UBXN8O00124 270 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 PSMD12O00232 456 aaPredicted RBP12.9□□□□□ -0.34
SCAF1-203ENST00000598359 RIPK2O43353 540 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 ERI3O43414 337 aaKnown RBP12.9□□□□□ -0.34
SCAF1-203ENST00000598359 PRAMEF2O60811 474 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 SH3BGRLO75368 114 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 SUPT3HO75486 399 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 MYZAPP0CAP1 466 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 EDN3P14138 238 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 COL8A1P27658 744 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 HNRNPFP52597 415 aaKnown RBP12.9□□□□□ -0.34
SCAF1-203ENST00000598359 PLA2G16P53816 162 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 GYS2P54840 703 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 KCNK10P57789 538 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 STXBP1P61764 594 aaKnown RBP12.9□□□□□ -0.34
SCAF1-203ENST00000598359 AP2B1P63010 937 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 SKP1P63208 163 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 ILF2Q12905 390 aaKnown RBP12.9□□□□□ -0.34
SCAF1-203ENST00000598359 EXT1Q16394 746 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 PDK4Q16654 411 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 MROH9Q5TGP6 573 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 ZNF324BQ6AW86 544 aaPredicted RBP12.9□□□□□ -0.34
SCAF1-203ENST00000598359 QSOX2Q6ZRP7 698 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 ISCA2Q86U28 154 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 KRT78Q8N1N4 520 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 TCAIMQ8N3R3 496 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 PDPRQ8NCN5 879 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 TMEM52Q8NDY8 209 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 KCTD4Q8WVF5 259 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 GAL3ST3Q96A11 431 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 NXNL1Q96CM4 212 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 ZNF354BQ96LW1 612 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 SLX1AQ9BQ83 275 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 RNF32Q9H0A6 362 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 CDC42EP4Q9H3Q1 356 aaKnown RBP12.9□□□□□ -0.34
SCAF1-203ENST00000598359 CNOT10Q9H9A5 744 aaKnown RBP12.9□□□□□ -0.34
SCAF1-203ENST00000598359 MMP25Q9NPA2 562 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 KLHL1Q9NR64 748 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 TEKT2Q9UIF3 430 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 SLC5A6Q9Y289 635 aa12.9□□□□□ -0.34
SCAF1-203ENST00000598359 MYOCOSA0A1B0GUC4 107 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 HMX2A2RU54 273 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 ANKDD1BA6NHY2 528 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 TGFBR3LH3BV60 316 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 CLDN1O95832 211 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 S100BP04271 92 aaPredicted RBP12.89□□□□□ -0.35
SCAF1-203ENST00000598359 MST1P26927 711 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 PPP2R1BP30154 601 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 CD96P40200 585 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 TDGF1P3P51864 188 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 DMTNQ08495 405 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 TUBA3CQ13748 450 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 GLIPR1L2Q4G1C9 344 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 ZNF766Q5HY98 468 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 TUBA3EQ6PEY2 450 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 TBC1D1Q86TI0 1168 aaPredicted RBP12.89□□□□□ -0.35
SCAF1-203ENST00000598359 FAM47BQ8NA70 645 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 OR2W6PQ8NHA6 318 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 SUN3Q8TAQ9 357 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 TLCD1Q96CP7 247 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 PGM2Q96G03 612 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 FAR2Q96K12 515 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 C5orf34Q96MH7 638 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 QRFPRQ96P65 431 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 F2RL3Q96RI0 385 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 ATOH8Q96SQ7 321 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 CD244Q9BZW8 370 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 CDCP1Q9H5V8 836 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 PRDM9Q9NQV7 894 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 NINJ2Q9NZG7 142 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 GPRC5BQ9NZH0 403 aa12.89□□□□□ -0.35
SCAF1-203ENST00000598359 IGKV3D-11A0A0A0MRZ8 115 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 TCRBV16S1A1N1A0A5B0 115 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 WIPF3A6NGB9 483 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 LRRC14BA6NHZ5 514 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 SAGE2PA6NJ88 616 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 GABRR3A8MPY1 467 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 LRRTM2O43300 516 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 CLEC3AO75596 197 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 RASAL1O95294 804 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 DDAH2O95865 285 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 ABHD2P08910 425 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 LTA4HP09960 611 aaKnown RBP12.88□□□□□ -0.35
SCAF1-203ENST00000598359 CERS1P27544 350 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms