RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 MMP25Q9NPA2 562 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 SAYSD1Q9NPB0 183 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 ZNF358Q9NW07 568 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 DNAJB12Q9NXW2 375 aaKnown RBP10.44□□□□□ -0.74
CCDC47-206ENST00000584112 IKZF3Q9UKT9 509 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 OR2W5A6NFC9 320 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 A8MUI8 341 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 PSMD12O00232 456 aaPredicted RBP10.43□□□□□ -0.74
CCDC47-206ENST00000584112 CDK2AP1O14519 115 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 CHST10O43529 356 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 SPRY1O43609 319 aaPredicted RBP10.43□□□□□ -0.74
CCDC47-206ENST00000584112 H2AFYO75367 372 aaKnown RBP10.43□□□□□ -0.74
CCDC47-206ENST00000584112 WDR47O94967 919 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 RASAL1O95294 804 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 SERPINA6P08185 405 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 GSTA2P09210 222 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 RNH1P13489 461 aaKnown RBP10.43□□□□□ -0.74
CCDC47-206ENST00000584112 GSTM2P28161 218 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 SSTR1P30872 391 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 HPDP32754 393 aaPredicted RBP10.43□□□□□ -0.74
CCDC47-206ENST00000584112 OR4D2P58180 307 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 TAS2R50P59544 299 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 USP10Q14694 798 aaKnown RBP10.43□□□□□ -0.74
CCDC47-206ENST00000584112 RBBP5Q15291 538 aaKnown RBP10.43□□□□□ -0.74
CCDC47-206ENST00000584112 TSNQ15631 228 aaKnown RBP10.43□□□□□ -0.74
CCDC47-206ENST00000584112 ACER2Q5QJU3 275 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 ZNF324BQ6AW86 544 aaPredicted RBP10.43□□□□□ -0.74
CCDC47-206ENST00000584112 C16orf47Q6ZP98 133 aaPredicted RBP10.43□□□□□ -0.74
CCDC47-206ENST00000584112 QSOX2Q6ZRP7 698 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 KLHDC8AQ8IYD2 350 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 LGI4Q8N135 537 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 SLC5A8Q8N695 610 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 ANKRD53Q8N9V6 530 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 ARMC2Q8NEN0 867 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 SPATA4Q8NEY3 305 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 OR5T3Q8NGG3 340 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 ADAMTS18Q8TE60 1221 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 RHBDF1Q96CC6 855 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 SEC16BQ96JE7 1060 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 TAAR6Q96RI8 345 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 MCMBPQ9BTE3 642 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 CAPS2Q9BXY5 557 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 KRTAP17-1Q9BYP8 105 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 PHACTR1Q9C0D0 580 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 PITHD1Q9GZP4 211 aaPredicted RBP10.43□□□□□ -0.74
CCDC47-206ENST00000584112 DPH5Q9H2P9 285 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 SPNS1Q9H2V7 528 aa10.43□□□□□ -0.74
CCDC47-206ENST00000584112 CNOT10Q9H9A5 744 aaKnown RBP10.43□□□□□ -0.74
CCDC47-206ENST00000584112 UTP11Q9Y3A2 253 aaKnown RBP10.43□□□□□ -0.74
CCDC47-206ENST00000584112 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.42□□□□□ -0.741e-6■■□□□ 14.5
CCDC47-206ENST00000584112 A0A088AWK7 358 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 SMAD7O15105 426 aaKnown RBP10.42□□□□□ -0.74
CCDC47-206ENST00000584112 RAD51CO43502 376 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 PRMT3O60678 531 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 CRLF1O75462 422 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 UNC5CO95185 931 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 CCDC166P0CW27 439 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 C1GALT1C1LP0DN25 315 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 STMN1P16949 149 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 IGFBP2P18065 325 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 ZNF10P21506 573 aaPredicted RBP10.42□□□□□ -0.74
CCDC47-206ENST00000584112 HOXC12P31275 282 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 CASQ1P31415 396 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 GP5P40197 560 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 HNF4AP41235 474 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 SLC6A12P48065 614 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 SLC26A5P58743 744 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 RAB8AP61006 207 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 ATP6V0D1P61421 351 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 OLR1P78380 273 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 CAV1Q03135 178 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 TGFBIQ15582 683 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 ZNF766Q5HY98 468 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 CDKL4Q5MAI5 379 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 TMIGD1Q6UXZ0 262 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 CYS1Q717R9 158 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 GPSM1Q86YR5 675 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 CRLF3Q8IUI8 442 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 BEST3Q8N1M1 668 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 KRT78Q8N1N4 520 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 HORMAD2Q8N7B1 307 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 ANKRD49Q8WVL7 239 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 TSLPQ969D9 159 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 GAL3ST3Q96A11 431 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 FAR2Q96K12 515 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 PTCHD1Q96NR3 888 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 GPR22Q99680 433 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 RBBP8Q99708 897 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 UTP23Q9BRU9 249 aaKnown RBP10.42□□□□□ -0.74
CCDC47-206ENST00000584112 RAB17Q9H0T7 212 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 SMYD2Q9NRG4 433 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 WWOXQ9NZC7 414 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 GPRC5BQ9NZH0 403 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 TRPS1Q9UHF7 1281 aa10.42□□□□□ -0.74
CCDC47-206ENST00000584112 MTO1Q9Y2Z2 717 aaKnown RBP10.42□□□□□ -0.74
CCDC47-206ENST00000584112 ZNF407Q9C0G0 2248 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 TCRBV9S1A1TA0A576 114 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 NCF1BA6NI72 391 aaPredicted RBP10.41□□□□□ -0.74
CCDC47-206ENST00000584112 NCF1CA8MVU1 366 aaPredicted RBP10.41□□□□□ -0.74
CCDC47-206ENST00000584112 CLGNO14967 610 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms