RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 IL10P22301 178 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 CCNFP41002 786 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 RPS4XP62701 263 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 NFKBIBQ15653 356 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 LIPNQ5VXI9 398 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 PTRHD1Q6GMV3 140 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 APTXQ7Z2E3 356 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 LRRC25Q8N386 305 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 STYXQ8WUJ0 223 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 ZNF480Q8WV37 535 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 ALS2CR12Q96Q35 445 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 VAT1Q99536 393 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 FAM118BQ9BPY3 351 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 TSSK1BQ9BXA7 367 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 PACSIN1Q9BY11 444 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 PRDM14Q9GZV8 571 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 ESRP2Q9H6T0 727 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 ACKR4Q9NPB9 350 aa12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 EIF2B3Q9NR50 452 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-213ENST00000580446 DYSFO75923 2080 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 A0A087X0T9 212 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 SLC35F4A4IF30 521 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 ZNF487B1APH4 448 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 KIF5CO60282 957 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 ACSL3O95573 720 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 SLC16A8O95907 504 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 SYF2O95926 243 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 SOD3P08294 240 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 FAM228BP0C875 321 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 THBS2P35442 1172 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 HNF4AP41235 474 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 NR2C2P49116 596 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 RPS15AP62244 130 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 MEF2AQ02078 507 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 ANKRD20A4Q4UJ75 823 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 ANKRD20A2Q5SQ80 823 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 ANKRD20A1Q5TYW2 823 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 ANKRD20A3Q5VUR7 823 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 ITPRIPL1Q6GPH6 555 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 ZNF534Q76KX8 674 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 CLNKQ7Z7G1 428 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 CAMKVQ8NCB2 501 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 OR13J1Q8NGT2 312 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 SGMS2Q8NHU3 365 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 P3H4Q92791 437 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 GTPBP3Q969Y2 492 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 TM4SF19Q96DZ7 209 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 WDYHV1Q96HA8 205 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 ART5Q96L15 291 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 FOPNLQ96NB1 174 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 SFXN3Q9BWM7 321 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 UGT2B28Q9BY64 529 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 PROK2Q9HC23 129 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 MARCH4Q9P2E8 410 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 MYO6Q9UM54 1294 aa12.84□□□□□ -0.35
CSNK1D-213ENST00000580446 EML6Q6ZMW3 1958 aa12.83□□□□□ -0.35
CSNK1D-213ENST00000580446 PRKDCP78527 4128 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 A0A096LNT2 108 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 E7ENX8 843 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 H7C0C1 242 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 MYO1CO00159 1063 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 HS3ST1O14792 307 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 MATN4O95460 622 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 CDKN2BP42772 138 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 ATP5OP48047 213 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 RAB8AP61006 207 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 TAP2Q03519 686 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 FAPQ12884 760 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 BMPR2Q13873 1038 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 PRPSAP1Q14558 356 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 P3H1Q32P28 736 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 MIDNQ504T8 468 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 ODF2Q5BJF6 829 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 FAM120AOSQ5T036 256 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 CAPN13Q6MZZ7 669 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 AFAP1L2Q8N4X5 818 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 GOLM1Q8NBJ4 401 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 TUBA1CQ9BQE3 449 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 OPN3Q9H1Y3 402 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 BOKQ9UMX3 212 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 AAR2Q9Y312 384 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 SLC22A7Q9Y694 548 aa12.83□□□□□ -0.36
CSNK1D-213ENST00000580446 FAM234BA2RU67 622 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 NDUFS4O43181 175 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 UGT2B10P36537 528 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 HNRNPFP52597 415 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 ABATP80404 500 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 RELAQ04206 551 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 SRYQ05066 204 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 EIPR1Q53HC9 387 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 ZNF474Q6S9Z5 364 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 DNM1P46Q6ZS02 220 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 SYDE1Q6ZW31 735 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 KIAA1328Q86T90 577 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 TMEM52Q8NDY8 209 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 AKAP1Q92667 903 aaKnown RBP eCLIP12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 ZNF778Q96MU6 729 aa12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 EBNA1BP2Q99848 306 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-213ENST00000580446 C19orf43Q9BQ61 176 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms