RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 NMD3Q96D46 503 aaKnown RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 DTNBP1Q96EV8 351 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 NSMCE3Q96MG7 304 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 TPT1P8Q9HAU6 139 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 SLC17A4Q9Y2C5 497 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 UNC13CQ8NB66 2214 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 E2F3O00716 465 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 CLEC3AO75596 197 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 HBQ1P09105 142 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 MPLP40238 635 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 B4GALNT1Q00973 533 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 CLCA4Q14CN2 919 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 SPESP1Q6UW49 350 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 KIAA0907Q7Z7F0 614 aaPredicted RBP9.66□□□□□ -0.86
SMG6-213ENST00000573166 OR2L3Q8NG85 312 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 JSRP1Q96MG2 331 aaPredicted RBP9.66□□□□□ -0.86
SMG6-213ENST00000573166 C1QTNF1Q9BXJ1 281 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 DMRT3Q9NQL9 472 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 MYO16Q9Y6X6 1858 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 TMX2-CTNND1H3BSU7 103 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 COQ9O75208 318 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 CPNE6O95741 557 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 CST1P01037 141 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 ZNF888P0CJ79 500 aaPredicted RBP9.66□□□□□ -0.86
SMG6-213ENST00000573166 BCKDHBP21953 392 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 CRISP3P54108 245 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 ITGA1P56199 1179 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 RPS7P62081 194 aaKnown RBP9.66□□□□□ -0.86
SMG6-213ENST00000573166 BLMHQ13867 455 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 OR52E8Q6IFG1 317 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMG6-213ENST00000573166 ARL10Q8N8L6 244 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 ZNF548Q8NEK5 533 aaPredicted RBP9.66□□□□□ -0.86
SMG6-213ENST00000573166 DOK4Q8TEW6 326 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 GAB3Q8WWW8 586 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 KRT84Q9NSB2 600 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 AIG1Q9NVV5 245 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 PDP2Q9P2J9 529 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 SNX11Q9Y5W9 270 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 DNAJA2O60884 412 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 RDH16O75452 317 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 NCK1P16333 377 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 SMIM11AP58511 58 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 BIKQ13323 160 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 ANGPT1Q15389 498 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 NSDHLQ15738 373 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 HLA-BQ31612 363 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 C16orf87Q6PH81 154 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 PPP1R3BQ86XI6 285 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 OR2L5Q8NG80 312 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 RSC1A1Q92681 617 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 THAP11Q96EK4 314 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 ANKRD27Q96NW4 1050 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 EDEM2Q9BV94 578 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 TCEAL2Q9H3H9 227 aaPredicted RBP9.66□□□□□ -0.86
SMG6-213ENST00000573166 RERGLQ9H628 205 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 Q9N2J8 555 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 SRPK3Q9UPE1 567 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 SAMHD1Q9Y3Z3 626 aaKnown RBP9.66□□□□□ -0.86
SMG6-213ENST00000573166 ABCA7Q8IZY2 2146 aa9.66□□□□□ -0.86
SMG6-213ENST00000573166 LMO7DNF2Z398 122 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 H0YGG7 62 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 HIST1H2ABP04908 130 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 AOC1P19801 751 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 TRPC1P48995 793 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 NUP107P57740 925 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 TAS2R38P59533 333 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 DSTNP60981 165 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 ARF3P61204 181 aaPredicted RBP9.65□□□□□ -0.86
SMG6-213ENST00000573166 ZNF33BQ06732 778 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 GPR68Q15743 365 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 NDUFAF5Q5TEU4 345 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 TLDC1Q6P9B6 456 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 CEACAM20Q6UY09 585 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 HIST3H2AQ7L7L0 130 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 CHMP1BQ7LBR1 199 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 CADM2Q8N3J6 435 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 RNF175Q8N4F7 328 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 MINDY1Q8N5J2 469 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 HIST1H2ACQ93077 130 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 BMFQ96LC9 184 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 TMEM74Q96NL1 305 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 C5AR2Q9P296 337 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 EBF1Q9UH73 591 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 BLOC1S6Q9UL45 172 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 PADI2Q9Y2J8 665 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 PGM3O95394 542 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 PDGFBP01127 241 aaPredicted RBP9.65□□□□□ -0.86
SMG6-213ENST00000573166 TFPIP10646 304 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 DRD2P14416 443 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 TCEA1P23193 301 aaKnown RBP9.65□□□□□ -0.86
SMG6-213ENST00000573166 CERS1P27544 350 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 TAS2R41P59536 307 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 SPIBQ01892 262 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 LPCAT4Q643R3 524 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 PLEKHM3Q6ZWE6 761 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 AMIGO2Q86SJ2 522 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 C19orf47Q8N9M1 422 aaKnown RBP9.65□□□□□ -0.86
SMG6-213ENST00000573166 OR56A1Q8NGH5 318 aa9.65□□□□□ -0.86
SMG6-213ENST00000573166 MZB1Q8WU39 189 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms