RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 POC1B-GALNT4F8VUJ3 575 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 PFDN6O15212 129 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 SEC14L5O43304 696 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 USP12O75317 370 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 CD160O95971 181 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 TPOP07202 933 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 EGR2P11161 476 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-222ENST00000570139 FCARP24071 287 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 ATP5F1P24539 256 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-222ENST00000570139 HLA-FP30511 346 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 CD70P32970 193 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 CSE1LP55060 971 aaKnown RBP6.85□□□□□ -1.31
CNOT1-222ENST00000570139 MAXP61244 160 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 ST8SIA6P61647 398 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 ZBTB16Q05516 673 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 BCL2L1Q07817 233 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 CAMK2DQ13557 499 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 LARS2Q15031 903 aaKnown RBP6.85□□□□□ -1.31
CNOT1-222ENST00000570139 KBTBD12Q3ZCT8 623 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 FUT11Q495W5 492 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 PLK5Q496M5 336 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 ANKRD20A4Q4UJ75 823 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 SIRPB2Q5JXA9 342 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 COLEC12Q5KU26 742 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 ARMC12Q5T9G4 340 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 GRTP1Q5TC63 336 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 LAIR1Q6GTX8 287 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 C22orf39Q6P5X5 142 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 ZNF474Q6S9Z5 364 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-222ENST00000570139 LCA5Q86VQ0 697 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 CNTN4Q8IWV2 1026 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 UEVLDQ8IX04 471 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 TERB1Q8NA31 727 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 FAM47BQ8NA70 645 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 ZBTB8BQ8NAP8 495 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-222ENST00000570139 SMRP1Q8NCR6 262 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 SETD6Q8TBK2 473 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 BRSK1Q8TDC3 778 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 HCAR2Q8TDS4 363 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 ASB10Q8WXI3 467 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 MSANTD3Q96H12 275 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 CABS1Q96KC9 395 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 Q96MF0 132 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 ZNF641Q96N77 438 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-222ENST00000570139 TRIB3Q96RU7 358 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 SMC6Q96SB8 1091 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 CPNE1Q99829 537 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 CCDC106Q9BWC9 280 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 SSBP3Q9BWW4 388 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-222ENST00000570139 NUAK2Q9H093 628 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 S1PR5Q9H228 398 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 OPA3Q9H6K4 179 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 DEC1Q9P2X7 70 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 WNT6Q9Y6F9 365 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 MUC22E2RYF6 1773 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-222ENST00000570139 ZNF106Q9H2Y7 1883 aaKnown RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 ZCWPW2A0A1B0GU75 182 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 CBY3A6NI87 242 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 C2orf81A6NN90 581 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 SRRM3A6NNA2 597 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 WASH3PC4AMC7 463 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 LINC01565O15544 149 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 PRPF4O43172 522 aaKnown RBP eCLIP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 SNAP91O60641 907 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 BANF1O75531 89 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 POP4O95707 220 aaKnown RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 SNRPAP09012 282 aaKnown RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 ELFN1P0C7U0 828 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 SRCP12931 536 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 ZNF182P17025 639 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 ZFP36P26651 326 aaKnown RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 SPRP35270 261 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 GRIA1P42261 906 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 SUOXP51687 545 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 MAGOHP61326 146 aaKnown RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 POLR2LP62875 67 aaKnown RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 ACVR1Q04771 509 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 GABPB1Q06547 395 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 RUNX3Q13761 415 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 POU6F1Q14863 301 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 TMED2Q15363 201 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 TAF1AQ15573 450 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 KCTD19Q17RG1 926 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 CARD16Q5EG05 197 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 CXorf66Q5JRM2 361 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-222ENST00000570139 TSTD2Q5T7W7 516 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 ZDHHC20Q5W0Z9 365 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 SLC2A7Q6PXP3 512 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 RAPH1Q70E73 1250 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 TBC1D26Q86UD7 250 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 ADIPOR2Q86V24 386 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 WDR5BQ86VZ2 330 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 KCNMB4Q86W47 210 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 CTAGE3PQ8IX95 158 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 APCDD1Q8J025 514 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 WFDC5Q8TCV5 224 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 ACMSDQ8TDX5 336 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 DCAKDQ8WVC6 231 aa6.84□□□□□ -1.31
CNOT1-222ENST00000570139 FAR1Q8WVX9 515 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms