RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ALDH4A1P30038 563 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 CLK1P49759 484 aaKnown RBP16.06■□□□□ 0.16
CMTM3-213ENST00000566756 HMGA2P52926 109 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 ST8SIA6P61647 398 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 OLR1P78380 273 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 ADAM15Q13444 863 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 ZNF404Q494X3 552 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 CRB2Q5IJ48 1285 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 ATAT1Q5SQI0 421 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 PERM1Q5SV97 790 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 TANGO2Q6ICL3 276 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 GPR153Q6NV75 609 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 TRIM40Q6P9F5 258 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 SLC46A3Q7Z3Q1 461 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 NRSN1Q8IZ57 195 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 RASGEF1AQ8N9B8 481 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 C9orf43Q8TAL5 461 aaPredicted RBP16.06■□□□□ 0.16
CMTM3-213ENST00000566756 SPPL2AQ8TCT8 520 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 CRELD1Q96HD1 420 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 ZFYVE19Q96K21 471 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 COL21A1Q96P44 957 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 SH3BP4Q9P0V3 963 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 TSC22D4Q9Y3Q8 395 aa16.06■□□□□ 0.16
CMTM3-213ENST00000566756 COL4A3Q01955 1670 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 GNG14A0A1W2PPG7 69 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 TMEM202A6NGA9 273 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 OTOL1A6NHN0 477 aaPredicted RBP16.05■□□□□ 0.16
CMTM3-213ENST00000566756 M0R082 166 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 GPR37L1O60883 481 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 TIMP2P16035 220 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 ZNF8P17098 575 aaPredicted RBP16.05■□□□□ 0.16
CMTM3-213ENST00000566756 GABRB1P18505 474 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 LIPAP38571 399 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 ETV3P41162 512 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 EIF2DP41214 584 aaKnown RBP16.05■□□□□ 0.16
CMTM3-213ENST00000566756 RPS13P62277 151 aaKnown RBP16.05■□□□□ 0.16
CMTM3-213ENST00000566756 TIGD6Q17RP2 521 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 ZNF630Q2M218 657 aaPredicted RBP16.05■□□□□ 0.16
CMTM3-213ENST00000566756 LRRC73Q5JTD7 316 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 VITQ6UXI7 678 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 UNC5DQ6UXZ4 953 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 PAGE2Q7Z2X7 111 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 SLC5A8Q8N695 610 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 GEMIN6Q8WXD5 167 aaKnown RBP16.05■□□□□ 0.16
CMTM3-213ENST00000566756 MYLIPQ8WY64 445 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 MAL2Q969L2 176 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 KCNC2Q96PR1 638 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 CPNE5Q9HCH3 593 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 MYNNQ9NPC7 610 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 C1GALT1Q9NS00 363 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 GPATCH2Q9NW75 528 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 CCDC59Q9P031 241 aaKnown RBP16.05■□□□□ 0.16
CMTM3-213ENST00000566756 IL36AQ9UHA7 158 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 DENND4AQ7Z401 1863 aa16.05■□□□□ 0.16
CMTM3-213ENST00000566756 PRRT4C9JH25 899 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 PSMD11O00231 422 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 PLK4O00444 970 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 CNOT3O75175 753 aaKnown RBP16.04■□□□□ 0.16
CMTM3-213ENST00000566756 LEFTY1O75610 366 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 HLA-EP13747 358 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 EEF1A2Q05639 463 aaKnown RBP16.04■□□□□ 0.16
CMTM3-213ENST00000566756 SCARB2Q14108 478 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 ZNF181Q2M3W8 571 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 ZNF658BQ4V348 819 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-213ENST00000566756 TDHQ8IZJ6 230 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 AMER2Q8N7J2 671 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 KBTBD8Q8NFY9 601 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 GGHQ92820 318 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 RPL3LQ92901 407 aaKnown RBP16.04■□□□□ 0.16
CMTM3-213ENST00000566756 WDR37Q9Y2I8 494 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 TESMINQ9Y4I5 508 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 SH3D21A4FU49 640 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 MPZL2O60487 215 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 UPK1BO75841 260 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 RPLP0P05388 317 aaKnown RBP16.04■□□□□ 0.16
CMTM3-213ENST00000566756 FURINP09958 794 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 CRATP43155 626 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 BDKRB1P46663 353 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 LIMS1P48059 325 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 SLC6A11P48066 632 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 CTSCP53634 463 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 LIMK1P53667 647 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 HBA1P69905 142 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 TMEM115Q12893 351 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-213ENST00000566756 IRF3Q14653 427 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 SF1Q15637 639 aaKnown RBP16.04■□□□□ 0.16
CMTM3-213ENST00000566756 ZNF385BQ569K4 471 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 ZNF805Q5CZA5 627 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 ARSIQ5FYB1 569 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 ZNF605Q86T29 641 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 ARMC8Q8IUR7 673 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 NEIL2Q969S2 332 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 SLC35A5Q9BS91 424 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 SGPP1Q9BX95 441 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 S1PR5Q9H228 398 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 KLK4Q9Y5K2 254 aa16.04■□□□□ 0.16
CMTM3-213ENST00000566756 C1orf105O95561 183 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 KRT75O95678 551 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 VIPP01282 170 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 CTSLP07711 333 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms