RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 IFT80Q9P2H3 777 aaPredicted RBP10.87□□□□□ -0.67
KARS-207ENST00000566560 DKK4Q9UBT3 224 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 CHD8Q9HCK8 2581 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 SERTM1A2A2V5 107 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 SLC28A1O00337 649 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 RGS14O43566 566 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 JUNP05412 331 aaKnown RBP10.86□□□□□ -0.67
KARS-207ENST00000566560 LINC00032P0C843 101 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 SMIM10L1P0DMW3 83 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 KITP10721 976 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 PIM1P11309 404 aaPredicted RBP10.86□□□□□ -0.67
KARS-207ENST00000566560 HIST1H1TP22492 207 aaPredicted RBP10.86□□□□□ -0.67
KARS-207ENST00000566560 STAT5AP42229 794 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 TSFMP43897 325 aaKnown RBP10.86□□□□□ -0.67
KARS-207ENST00000566560 ARFIP1P53367 373 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 MAT1AQ00266 395 aaKnown RBP10.86□□□□□ -0.67
KARS-207ENST00000566560 NCF4Q15080 339 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 AP5B1Q2VPB7 878 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 UGT3A2Q3SY77 523 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 SPIN4Q56A73 249 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 XKR7Q5GH72 579 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 SPDYAQ5MJ70 313 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 UNQ6494/PRO21346Q6UXR6 183 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 ZNF517Q6ZMY9 492 aaPredicted RBP10.86□□□□□ -0.67
KARS-207ENST00000566560 ZNF793Q6ZN11 406 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 COX15Q7KZN9 410 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 TRIM46Q7Z4K8 759 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 UBE3DQ7Z6J8 389 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 DTX1Q86Y01 620 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 C1orf52Q8N6N3 182 aaKnown RBP10.86□□□□□ -0.67
KARS-207ENST00000566560 IL22RA1Q8N6P7 574 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 AMER3Q8N944 861 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 PLPP7Q8NBV4 271 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 OR5T3Q8NGG3 340 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 OR2T11Q8NH01 316 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 CT55Q8WUE5 264 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 KCNE4Q8WWG9 221 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 FGF11Q92914 225 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 FKBP10Q96AY3 582 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 SMIM10Q96HG1 83 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 PPP1R36Q96LQ0 422 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 QRFPRQ96P65 431 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 SERINC2Q96SA4 455 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 ZNF717Q9BY31 904 aaPredicted RBP10.86□□□□□ -0.67
KARS-207ENST00000566560 RBCK1Q9BYM8 510 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 PNPOQ9NVS9 261 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 AHSPQ9NZD4 102 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 TRPC4Q9UBN4 977 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 VPS29Q9UBQ0 182 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 CTSFQ9UBX1 484 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 GPN3Q9UHW5 284 aaPredicted RBP10.86□□□□□ -0.67
KARS-207ENST00000566560 PADI1Q9ULC6 663 aa10.86□□□□□ -0.67
KARS-207ENST00000566560 A0A0A6YYD5 115 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 ARHGAP10A1A4S6 786 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 C1QTNF9BB2RNN3 333 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 TCP11X1B4DZS4 312 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 TLX3O43711 291 aaPredicted RBP10.85□□□□□ -0.67
KARS-207ENST00000566560 SCELO95171 688 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 C1QTNF9P0C862 333 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 ATP5A1P25705 553 aaKnown RBP10.85□□□□□ -0.67
KARS-207ENST00000566560 BSGP35613 385 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 MDH1P40925 334 aaKnown RBP10.85□□□□□ -0.67
KARS-207ENST00000566560 HK2P52789 917 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 BTKQ06187 659 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 ACSM2AQ08AH3 577 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 TBL3Q12788 808 aaKnown RBP10.85□□□□□ -0.67
KARS-207ENST00000566560 CLN3Q13286 438 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 DNASE1L3Q13609 305 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 TGIF1Q15583 401 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 SYT16Q17RD7 645 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 ACSM2BQ68CK6 577 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 OR4C11Q6IEV9 310 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 LCN10Q6JVE6 187 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 FAM199XQ6PEV8 388 aaPredicted RBP10.85□□□□□ -0.67
KARS-207ENST00000566560 PAGE2Q7Z2X7 111 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 COMMD6Q7Z4G1 85 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 METTL4Q8N3J2 472 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 ACOT4Q8N9L9 421 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 ZNF248Q8NDW4 579 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 PIWIL2Q8TC59 973 aaKnown RBP10.85□□□□□ -0.67
KARS-207ENST00000566560 NKD1Q969G9 470 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 KIAA1143Q96AT1 154 aaPredicted RBP10.85□□□□□ -0.67
KARS-207ENST00000566560 NAF1Q96HR8 494 aaKnown RBP10.85□□□□□ -0.67
KARS-207ENST00000566560 CCT7Q99832 543 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 YIPF2Q9BWQ6 316 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 NUF2Q9BZD4 464 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 AKIRIN1Q9H9L7 192 aaPredicted RBP10.85□□□□□ -0.67
KARS-207ENST00000566560 LRTM1Q9HBL6 345 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 PFDN4Q9NQP4 134 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 PRDM7Q9NQW5 492 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 SLC22A11Q9NSA0 550 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 RIC8BQ9NVN3 520 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 CROTQ9UKG9 612 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 PADI2Q9Y2J8 665 aa10.85□□□□□ -0.67
KARS-207ENST00000566560 CCDC88CQ9P219 2028 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 C21orf140B9A014 251 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 SLCO1B7G3V0H7 640 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 PSMD12O00232 456 aaPredicted RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 HDAC3O15379 428 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 CHST10O43529 356 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms