RNA–Protein interactions for RNA: ENST00000564738.5

NEIL1-205, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-205ENST00000564738 ZNF793Q6ZN11 406 aa17.7■□□□□ 0.42
NEIL1-205ENST00000564738 QSOX2Q6ZRP7 698 aa17.7■□□□□ 0.42
NEIL1-205ENST00000564738 UBE2E3Q969T4 207 aa17.7■□□□□ 0.42
NEIL1-205ENST00000564738 SEC16BQ96JE7 1060 aa17.7■□□□□ 0.42
NEIL1-205ENST00000564738 NSUN5Q96P11 429 aaKnown RBP17.7■□□□□ 0.42
NEIL1-205ENST00000564738 CDK15Q96Q40 435 aa17.7■□□□□ 0.42
NEIL1-205ENST00000564738 CSF3RQ99062 836 aa17.7■□□□□ 0.42
NEIL1-205ENST00000564738 NPLQ9BXD5 320 aaPredicted RBP17.7■□□□□ 0.42
NEIL1-205ENST00000564738 NOL11Q9H8H0 719 aaKnown RBP17.7■□□□□ 0.42
NEIL1-205ENST00000564738 ACTR8Q9H981 624 aa17.7■□□□□ 0.42
NEIL1-205ENST00000564738 COPS7BQ9H9Q2 264 aaPredicted RBP17.7■□□□□ 0.42
NEIL1-205ENST00000564738 COPG1Q9Y678 874 aaKnown RBP17.7■□□□□ 0.42
NEIL1-205ENST00000564738 CCDC189A1A4V9 331 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 FOXO6A8MYZ6 492 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 TCP11X1B4DZS4 312 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 TGFBR3LH3BV60 316 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 GOLGA8RI6L899 631 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 E2F3O00716 465 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 MAN1A2O60476 641 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 COL6A2P12110 1019 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 NEK2P51955 445 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 MTTPP55157 894 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 LIM2P55344 173 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 SLC26A5P58743 744 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 MRPL49Q13405 166 aaKnown RBP17.69■□□□□ 0.42
NEIL1-205ENST00000564738 ZNF169Q14929 603 aaPredicted RBP17.69■□□□□ 0.42
NEIL1-205ENST00000564738 CPSF6Q16630 551 aaKnown RBP eCLIP17.69■□□□□ 0.42
NEIL1-205ENST00000564738 TSNAXIP1Q2TAA8 658 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 FAM219BQ5XKK7 198 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 CLNKQ7Z7G1 428 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 KIF2BQ8N4N8 673 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 HUS1BQ8NHY5 278 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 M1APQ8TC57 530 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 ATP6V1E2Q96A05 226 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 MTFMTQ96DP5 389 aaKnown RBP17.69■□□□□ 0.42
NEIL1-205ENST00000564738 SERINC2Q96SA4 455 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 MTERF1Q99551 399 aaKnown RBP17.69■□□□□ 0.42
NEIL1-205ENST00000564738 MAPKAP1Q9BPZ7 522 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.69■□□□□ 0.42
NEIL1-205ENST00000564738 PRDM9Q9NQV7 894 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 PRTFDC1Q9NRG1 225 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 TBK1Q9UHD2 729 aa17.69■□□□□ 0.42
NEIL1-205ENST00000564738 TNPO3Q9Y5L0 923 aaKnown RBP17.69■□□□□ 0.42
NEIL1-205ENST00000564738 A0A088AWK7 358 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 IGKV3D-11A0A0A0MRZ8 115 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 DYTNA2CJ06 578 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 OR7A17O14581 309 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 SMIM24O75264 130 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 TSPAN8P19075 237 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 ZNF10P21506 573 aaPredicted RBP17.68■□□□□ 0.42
NEIL1-205ENST00000564738 PPP2R1BP30154 601 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 ARL1P40616 181 aaPredicted RBP17.68■□□□□ 0.42
NEIL1-205ENST00000564738 RPS13P62277 151 aaKnown RBP17.68■□□□□ 0.42
NEIL1-205ENST00000564738 SRSF11Q05519 484 aaKnown RBP17.68■□□□□ 0.42
NEIL1-205ENST00000564738 SRSF1Q07955 248 aaKnown RBP eCLIP17.68■□□□□ 0.42
NEIL1-205ENST00000564738 TLR1Q15399 786 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 EXT1Q16394 746 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 DEPDC1Q5TB30 811 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 ABHD17BQ5VST6 288 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 LIPJQ5W064 366 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 TIFABQ6ZNK6 161 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 CRLF3Q8IUI8 442 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 TMEM151AQ8N4L1 468 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 HAS2Q92819 552 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 NPAS2Q99743 824 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 MRPL57Q9BQC6 102 aaKnown RBP17.68■□□□□ 0.42
NEIL1-205ENST00000564738 PNO1Q9NRX1 252 aaKnown RBP17.68■□□□□ 0.42
NEIL1-205ENST00000564738 TMEM216Q9P0N5 145 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 FBXW2Q9UKT8 454 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 DAPP1Q9UN19 280 aa17.68■□□□□ 0.42
NEIL1-205ENST00000564738 TCRBV16S1A1N1A0A5B0 115 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 CYR61O00622 381 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 SHBGP04278 402 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 ATP5A1P25705 553 aaKnown RBP17.67■□□□□ 0.42
NEIL1-205ENST00000564738 TGM3Q08188 693 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 SLC13A2Q13183 592 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 EIF2S3LQ2VIR3 472 aaKnown RBP17.67■□□□□ 0.42
NEIL1-205ENST00000564738 AP5B1Q2VPB7 878 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 KHDRBS2Q5VWX1 349 aaKnown RBP17.67■□□□□ 0.42
NEIL1-205ENST00000564738 CHSY3Q70JA7 882 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 ACOT4Q8N9L9 421 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 GALNT11Q8NCW6 608 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 OR52B6Q8NGF0 335 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 UBLCP1Q8WVY7 318 aaPredicted RBP17.67■□□□□ 0.42
NEIL1-205ENST00000564738 CMTM7Q96FZ5 175 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 TBCDQ9BTW9 1192 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 MRPL46Q9H2W6 279 aaKnown RBP17.67■□□□□ 0.42
NEIL1-205ENST00000564738 CDCP1Q9H5V8 836 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 ZBTB26Q9HCK0 441 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 MMP25Q9NPA2 562 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 SEMA4BQ9NPR2 832 aaPredicted RBP17.67■□□□□ 0.42
NEIL1-205ENST00000564738 ANKRD10Q9NXR5 420 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 KCMF1Q9P0J7 381 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 PCTPQ9UKL6 214 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 MMACHCQ9Y4U1 282 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 CLDN16Q9Y5I7 305 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 SHANK1Q9Y566 2161 aa17.67■□□□□ 0.42
NEIL1-205ENST00000564738 TENM4Q6N022 2769 aa17.66■□□□□ 0.42
NEIL1-205ENST00000564738 IQANK1A0A1B0GTG1 560 aa17.66■□□□□ 0.42
NEIL1-205ENST00000564738 A0A1W2PPM1 405 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms